Pseudomonas species SXM-1 |
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Putative Pseudomonas species SXM-1 RM systems
Ref: Wang,W. et al. unpublished
REBASE ref # 28630
Complete sequence: 7,226,716 bp
GenBank #: CP038001
REBASE acronym: PspSXM1
Org_num: 34465
All begin DCC84_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 12000 | site-specific integrase | |||
| 12005 | M | M.PspKK18ORFFP (100% identity) | M.PspSXM1ORF12005P | |
| 12010 | S | S.PspKK18ORFFP (100% identity) | S.PspSXM1ORF12005P | |
| 12015 | R | PspKK18ORFFP (100% identity) | PspSXM1ORF12005P | |
| 12020 | M48 family peptidase | |||
| 12020 | M48 family peptidase | |||
| 12025 | M | M.PspKK18ORFEP (98% identity) | M.PspSXM1ORF12025P | |
| 12030 | S | S.PspKK18ORFEP (100% identity) | S.PspSXM1ORF12025P | |
| 12035 | 0 aa hypothetical protein | |||
| 12040 | R | PspKK18ORFEP (100% identity) | PspSXM1ORF12025P | |
| 12045 | 185 aa hypothetical protein | |||
| 30155 | 87 aa hypothetical protein | |||
| 30160 | M | M.Pst14405ORFGP (80% identity) | M.PspSXM1ORF30160P | |
| 30165 | S | S.Ppu33019ORF210P (48% identity) | S.PspSXM1ORF30160P | |
| 30170 | R | Pme23650ORF13420P (81% identity) | PspSXM1ORF30160P | |
| 30175 | M48 family peptidase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3915 | DUF4102 domain-containing protein | |||
| 3920 | RM | Bmu1ORF5778P (56% identity) | PspSXM1ORF3920P | |
| 3925 | NgoFVII family restriction endonuclease | |||
| 11190 | 452 aa hypothetical protein | |||
| 11195 | M | M.Pbr365DndEP (98% identity) | M.PspSXM1DndEP | |
| 11200 | DNA sulfur modification protein DndD | |||
| 11195 | DNA sulfur modification protein DndE | |||
| 11200 | M | M.Pbr365DndDP (98% identity) | M.PspSXM1DndDP | |
| 11205 | DNA phosphorothioation system sulfurtransferase | |||
| 11200 | DNA sulfur modification protein DndD | |||
| 11205 | M | M.Pbr365DndCP (98% identity) | M.PspSXM1DndCP | |
| 11210 | DNA sulfur modification protein DndB | |||
| 11205 | DNA phosphorothioation system sulfurtransferase | |||
| 11210 | M | M.Pbr365DndBP (99% identity) | M.PspSXM1DndBP | |
| 11215 | restriction endonuclease | |||
| 15540 | DUF4224 domain-containing protein | |||
| 15545 | M | M.PliPIgORF7940P (96% identity) | M.PspSXM1ORF15545P | |
| 15550 | phosphohydrolase | |||
| 15760 | lysis protein | |||
| 15765 | M | M.Ppo1114ORF14145P (94% identity) | M.PspSXM1ORF15765P | |
| 15770 | 109 aa hypothetical protein | |||
| 15905 | 80 aa hypothetical protein | |||
| 15910 | M | M.PspPGW29ORF33360P (93% identity) | M.PspSXM1ORF15910P | |
| 15915 | 119 aa hypothetical protein | |||
| 15925 | 122 aa hypothetical protein | |||
| 15930 | M | M.PspC2ORFAP (95% identity) | M.PspSXM1ORF15930P | |
| 15935 | 270 aa hypothetical protein | |||
| 25085 | DUF159 family protein | |||
| 25090 | M | M.Pspb193ORF20365P (99% identity) | M.PspSXM1ORF25090P | |
| 25095 | phage portal protein | |||
| 25285 | 200 aa hypothetical protein | |||
| 25290 | M | M.PspGXZCORF25595P (97% identity) | M.PspSXM1ORF25290P | |
| 25295 | 208 aa hypothetical protein | |||
| 25300 | 83 aa hypothetical protein | |||
| 25305 | M | M.PflML11AORF320P (95% identity) | M.PspSXM1ORF25305P | |
| 25310 | 69 aa hypothetical protein | |||
| 26040 | ribonucleotide-diphosphate reductase subunit | |||
| 26045 | M | M.PspKK18ORFAP (100% identity) | M.PspSXM1ORF26045P | |
| 26050 | ATP-binding protein | |||