Escherichia coli CFSAN027350 |
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Putative Escherichia coli CFSAN027350 RM systems
Ref: Gonzalez-Escalona,N. and Hoffmann,M. unpublished
REBASE ref # 28569
| Sequence length: | GenBank #: | |
| Chromosome: | 5,436,079 bp | CP037941 |
| plasmid pCFSAN027350: | 157,534 bp | CP037942 |
REBASE acronym: Eco27350
Org_num: 34293
All begin EKI55_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6350 | endoribonuclease SymE | |||
| 6355 | S | S.EcoSTEC508ORF24455P (100% identity) | TACNNNNNNNRTRTC | S.Eco27350ORF6360P |
| 6360 | M | M.Sbo192ORF9605P (100% identity) | TACNNNNNNNRTRTC | M.Eco27350ORF6360P |
| 6365 | R | EcosLF82ORF3455P (100% identity) | TACNNNNNNNRTRTC | Eco27350ORF6360P |
| 6370 | 322 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 135 | DNA-binding transcriptional regulator Fis | |||
| 140 | M | M.Eco3716ORFFP (100% identity) | ATGCAT | M.Eco27350ORF140P |
| 145 | DUF2556 domain-containing protein | |||
| 705 | ribulose-phosphate 3-epimerase | |||
| 710 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco27350DamP |
| 715 | cell division protein DamX | |||
| 11760 | L,D-transpeptidase | |||
| 11765 | R | EcoE2855ORF872P (91% identity) | GGTNACC | Eco27350ORF11770P |
| 11770 | M | M.EcoE2855ORF872P (100% identity) | GGTNACC | M.Eco27350ORF11770P |
| 11775 | recombinase family protein | |||
| 15770 | 81 aa hypothetical protein | |||
| 15775 | M | M.Ecos15739ORF2910P (100% identity) | M.Eco27350ORF15775P | |
| 15780 | 329 aa hypothetical protein | |||
| 19610 | drug/metabolite exporter YedA | |||
| 19615 | V | V.SflSTLE3DcmP (100% identity) | V.Eco27350DcmP | |
| 19620 | M | M.SflSTLE3DcmP (100% identity) | CCWGG | M.Eco27350DcmP |
| 19625 | HD domain-containing protein | |||
| 22380 | NinE family protein | |||
| 22385 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Eco27350ORFBP |
| 22390 | recombination protein NinB | |||
| 22550 | 55 aa hypothetical protein | |||
| ??? | M | M.Eco3277ORFBP (100% identity) | M.Eco27350ORFAP | |
| 22565 | DUF1382 family protein | |||
| plasmid pCFSAN027350 | ||||
| 28540 | 59 aa hypothetical protein | |||
| 28545 | M | M.Eco657ORF24160P (100% identity) | M.Eco27350ORF28545P | |
| 28550 | 73 aa hypothetical protein | |||