Prevotella intermedia KCOM 1945 |
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Putative Prevotella intermedia KCOM 1945 RM systems
Ref: Kook,J.-K. et al. unpublished
REBASE ref # 24621
GenBank #: PENE00000000
REBASE acronym: Pin1945
Org_num: 33998
All begin CTM45_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 9285 | nicotinamidase | |||
| 9290 | M | M.Pin1779ORF11430P (98% identity) | ACAYNNNNNTGG | M.Pin1945II |
| 9295 | S | S.Pin2836ORF10700P (63% identity) | ACAYNNNNNTGG | S.Pin1945II |
| 9300 | R | Pin14ORF436P (99% identity) | ACAYNNNNNTGG | Pin1945IIP |
| 9305 | zinc-dependent metalloprotease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 590 | 211 aa hypothetical protein | |||
| 595 | R | Pin1949ORF1640P (99% identity) | Pin1945ORF600P | |
| 600 | M | M.Pin1949ORF1640P (100% identity) | M.Pin1945ORF600P | |
| 605 | polyketide cyclase | |||
| 11530 | 148 aa hypothetical protein | |||
| 11535 | M | M.Pin2837ORF6225P (48% identity) | M.Pin1945ORF11535P | |
| 11540 | 128 aa hypothetical protein | |||
| 13045 | ATP-dependent helicase | |||
| 13050 | RM | Pin1949ORF12085P (100% identity) | Pin1945ORF13050P | |
| 13055 | 342 aa hypothetical protein | |||
| 6055 | 293 aa hypothetical protein | |||
| 6060 | R | Pin1949IP (100% identity) | GATC | Pin1945IP |
| 6065 | M | M.Pin1949I (100% identity) | GATC | M.Pin1945I |
| 6070 | 4-hydroxy-3-methylbut-2-enyl diphosphate | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8650 | 453 aa hypothetical protein | |||
| 8655 | M | M.Pin1949ORF2410P (99% identity) | M.Pin1945ORF8655P | |
| 8660 | R | Pin1949ORF2410P (99% identity) | Pin1945ORF8655P | |
| 8665 | transcriptional regulator | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9965 | aspartate 1-decarboxylase | |||
| 9970 | R | Pin1101McrBP (95% identity) | Pin1945McrBP | |
| 9975 | R | Pin1949McrCP (97% identity) | Pin1945McrCP | |
| 9980 | polyketide cyclase | |||