Neisseria gonorrhoeae TFG-B2 |
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Putative Neisseria gonorrhoeae TFG-B2 RM systems
Ref: Buckley,C. et al. unpublished
REBASE ref # 28393
Complete sequence: 2,220,306 bp
GenBank #: CP032429
REBASE acronym: NgoTFGB2
Org_num: 33859
All begin TFGB2_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 403 | ADP-L-glycero-D-manno-heptose-6-epimerase | |||
| 404 | M | M.NgoTFGA2ORFAP (100% identity) | M.NgoTFGB2ORFAP | |
| 406 | 283 aa hypothetical protein | |||
| 407 | S | S.NgoSH240ORFMP (100% identity) | S.NgoTFGB2ORFAP | |
| 408 | R | NgoWSIIP (100% identity) | NgoTFGB2ORFAP | |
| 409 | ATP-dependent Clp protease ATP-binding subunit | |||
| 701 | Replication-associated recombination protein A | |||
| ??? | R | NgoTFGA2ORF948P (99% identity) | GAGNNNNNTAC | NgoTFGB2ORF708P |
| 704 | 77 aa hypothetical protein | |||
| 705 | S | S.NgoWSI (100% identity) | GAGNNNNNTAC | S.NgoTFGB2ORF708P |
| 706 | 186 aa hypothetical protein | |||
| 707 | 279 aa hypothetical protein | |||
| 708 | M | M.NgoWSI (100% identity) | GAGNNNNNTAC | M.NgoTFGB2ORF708P |
| 709 | Riboflavin biosynthesis protein RibBA | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6 | Leucine--tRNA ligase | |||
| 7 | R | Ngos1291ORF5750P (100% identity) | GATC | NgoTFGB2ORF7P |
| ??? | site-specific DNA-methyltransferase | |||
| 7 | Type-2 restriction enzyme DpnI | |||
| ??? | M | M.NgoWPORF8P (100% identity) | M.NgoTFGB2ORF8P | |
| 9 | 151 aa hypothetical protein | |||
| 297 | Phenylalanine--tRNA ligase alpha subunit | |||
| 298 | V | V.NgoWSORF391P (100% identity) | V.NgoTFGB2ORF299P | |
| ??? | M | M.NgoTFGA2ORF298P (100% identity) | M.NgoTFGB2ORF299P | |
| 301 | R | NgoTFGA2ORF298P (100% identity) | NgoTFGB2ORF299P | |
| 302 | Phenylalanine--tRNA ligase beta subunit | |||
| 355 | 215 aa hypothetical protein | |||
| 356 | RM | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | NgoTFGB2ORF356P |
| 357 | S | S.NgoWSORF450P (100% identity) | GACNNNNNTGA | S.NgoTFGB2ORF356P |
| 358 | 140 aa hypothetical protein | |||
| 362 | Uroporphyrinogen decarboxylase | |||
| 363 | H | H.Ngos1291ORF7560P (100% identity) | H.NgoTFGB2ORF365P | |
| 364 | R | Ngos1291ORF7560P (100% identity) | GCSGC | NgoTFGB2ORF365P |
| 365 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.NgoTFGB2ORF365P |
| 366 | 71 aa hypothetical protein | |||
| 676 | 3-isopropylmalate dehydrogenase | |||
| 677 | R | NgoWSORF784P (100% identity) | GGNNCC | NgoTFGB2ORF678P |
| 678 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.NgoTFGB2ORF678P |
| 679 | 3-isopropylmalate dehydratase small subunit 1 | |||
| 932 | Anthranilate synthase component 1 | |||
| 933 | M | M.Ngos1291ORF10080P (100% identity) | GCCGGC | M.NgoTFGB2ORF933P |
| 934 | R | Ngos1291ORF10080P (100% identity) | GCCGGC | NgoTFGB2ORF933P |
| 935 | N5-carboxyaminoimidazole ribonucleotide | |||
| 1215 | phage protein | |||
| 1216 | V | V.Ngos1291ORF65P (100% identity) | V.NgoTFGB2ORF1219P | |
| ??? | R | NgoTFGA2ORF1210P (100% identity) | NgoTFGB2ORF1219P | |
| ??? | M | M.Ngos1291ORF65P (100% identity) | M.NgoTFGB2ORF1219P | |
| 1220 | 48 aa hypothetical protein | |||
| 1258 | UvrABC system protein A | |||
| 1259 | R | Ngos1291ORF260P (100% identity) | CCGCGG | NgoTFGB2ORF1260P |
| 1260 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.NgoTFGB2ORF1260P |
| 1261 | REP-associated tyrosine transposase | |||
| 1920 | Inner membrane protein YeeA | |||
| 1921 | R | Ngos1291ORF3515P (100% identity) | GGCC | NgoTFGB2ORF1922P |
| 1922 | M | M.Ngos1291ORF3515P (100% identity) | GGCC | M.NgoTFGB2ORF1922P |
| 1923 | Ribosome-recycling factor | |||
| 2019 | Sodium/glutamate symporter | |||
| 2020 | R | NgoWSIIIP (100% identity) | GGTGA | NgoTFGB2ORF2021P |
| 2021 | M | M1.Ngos1291II (100% identity) | GGTGA | M1.NgoTFGB2ORF2021P |
| 2022 | M | M2.Ngos1291II (100% identity) | GGTGA | M2.NgoTFGB2ORF2021P |
| 2023 | 30S ribosomal protein S1 | |||
| 2128 | GTPase Obg | |||
| 2129 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.NgoTFGB2ORF2129P |
| 2130 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | NgoTFGB2ORF2129P |
| 2131 | Cysteine--tRNA ligase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 545 | Peptidyl-prolyl cis-trans isomerase A | |||
| 546 | M | M.Ngos1291ORF8455P (100% identity) | CCACC | M.NgoTFGB2ORF546P |
| 547 | R | Ngos1291ORF8455P (100% identity) | CCACC | NgoTFGB2ORF546P |
| 548 | tRNA 2-thiocytidine biosynthesis protein TtcA | |||
| 641 | L-lactate dehydrogenase | |||
| 642 | R | NgoTFGA2ORF1011P (100% identity) | NgoTFGB2ORF644P | |
| ??? | M | M.Ngo9112ORF5535P (97% identity) | M.NgoTFGB2ORF644P | |
| 645 | tRNA pseudouridine synthase B | |||