Roseburia intestinalis L1-82 |
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Putative Roseburia intestinalis L1-82 RM systems
Ref: Petit,M.-A. and Lossouarn,J. unpublished
REBASE ref # 28401
Complete sequence: 4,493,348 bp
GenBank #: LR027880
REBASE acronym: RinL182
Org_num: 33868
All begin RIL182_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1265 | 494 aa hypothetical protein | |||
| 1266 | C | C.Rin182ORF6315P (100% identity) | C.RinL182ORF1268P | |
| 1267 | R | Rin182ORF6315P (100% identity) | RinL182ORF1268P | |
| 1268 | M | M.Rin182ORF6315P (100% identity) | M.RinL182ORF1268P | |
| 1269 | S | S3.Rin182ORF6315P (50% identity) | S1.RinL182ORF1268P | |
| 1270 | Tyrosine recombinase XerC | |||
| 1271 | S | S2.Rin182ORF6315P (100% identity) | S2.RinL182ORF1268P | |
| 1272 | S | S3.Rin182ORF6315P (68% identity) | S3.RinL182ORF1268P | |
| 1273 | 312 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 352 | 101 aa hypothetical protein | |||
| 353 | M | M.Rin6ORF42050P (100% identity) | M.RinL182ORF353P | |
| 354 | 771 aa hypothetical protein | |||
| 464 | 248 aa hypothetical protein | |||
| 465 | M | M.Rin182ORF2315P (100% identity) | M.RinL182ORF465P | |
| 466 | 149 aa hypothetical protein | |||
| 485 | 286 aa hypothetical protein | |||
| 486 | M | M.Rin182ORF2420P (100% identity) | M.RinL182ORF486P | |
| 487 | 92 aa hypothetical protein | |||
| 654 | 157 aa hypothetical protein | |||
| 655 | R | RinLORF5004P (100% identity) | RinL182ORF656P | |
| 656 | M | M.RinLORF5004P (100% identity) | M.RinL182ORF656P | |
| 657 | 339 aa hypothetical protein | |||
| 1003 | RNA polymerase sigma factor | |||
| 1004 | M | M.Rin182ORF5020P (100% identity) | M.RinL182ORF1004P | |
| 1005 | integral-membrane metallopeptidase M48 | |||
| 1021 | DNA methyltransferase | |||
| 1022 | M | M.Rin182ORF5105P (100% identity) | M.RinL182ORF1022P | |
| 1023 | cell wall hydrolase | |||
| 2256 | 85 aa hypothetical protein | |||
| 2257 | M | M.RinL182ORF11455P (96% identity) | M.RinL182ORF2257P | |
| 2258 | 262 aa hypothetical protein | |||
| 2435 | 811 aa hypothetical protein | |||
| 2436 | M | M.Rin182ORF12230P (100% identity) | M.RinL182ORF2436P | |
| 2437 | 702 aa hypothetical protein | |||
| 3839 | 130 aa hypothetical protein | |||
| 3840 | RM | Rin182ORF19175P (100% identity) | RinL182ORF3840P | |
| 3841 | 429 aa hypothetical protein | |||
| 3921 | 5-nucleotidase SurE | |||
| 3922 | R | Rin50ORF34380P (100% identity) | RinL182ORF3923P | |
| 3923 | M | M.Rin182ORF19600P (100% identity) | M.RinL182ORF3923P | |
| 3924 | Vancomycin B-type resistance protein VanW | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2976 | CTP pyrophosphohydrolase | |||
| 2977 | R | RinLORF6814P (100% identity) | RinL182ORF2977P | |
| 2978 | NAD-dependent malic enzyme | |||