Escherichia coli S65EC |
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Putative Escherichia coli S65EC RM systems
Ref: Nhu,N.T.K. et al. unpublished
REBASE ref # 28377
| Sequence length: | GenBank #: | |
| Chromosome: | 5,187,769 bp | CP036245 |
| plasmid pS65EC: | 146,792 bp | CP036244 |
REBASE acronym: EcoS65EC
Org_num: 33829
All begin S65EC_, S65EC_p
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 293 | 156 aa hypothetical protein | |||
| 294 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoS65ECORF295P |
| 295 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoS65ECORF295P |
| 296 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoS65ECORF295P |
| 297 | 260 aa hypothetical protein | |||
| 4897 | toxin-like protein of the SOS response | |||
| 4898 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | EcoS65ECORF4900P |
| 4899 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.EcoS65ECORF4900P |
| 4900 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.EcoS65ECORF4900P |
| 4901 | restriction of methylated adenine | |||
| plasmid pS65EC | ||||
| 22 | Phd_YefM | |||
| 23 | M | M.SenceORFJP (99% identity) | CAAYNNNNNNCTGG | M.EcoS65ECORF23P |
| 24 | S | S.SenceORFJP (100% identity) | CAAYNNNNNNCTGG | S.EcoS65ECORF23P |
| 25 | R | KpnKPH1ORF27575P (100% identity) | CAAYNNNNNNCTGG | EcoS65ECORF23P |
| 26 | Transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1012 | 71 aa hypothetical protein | |||
| 1013 | M | M.KpnYN1ORFGP (89% identity) | M.EcoS65ECORF1013P | |
| 1014 | DicA DNA-binding transcriptional repressor | |||
| 1452 | 65 aa hypothetical protein | |||
| 1453 | M | M.EcosS9ORF10680P (100% identity) | A | M.EcoS65ECORF1453P |
| 1456 | inhibitor of sS proteolysis | |||
| 2147 | membrane transport protein | |||
| 2148 | V | V.SflC32DcmP (74% identity) | V.EcoS65ECDcmP | |
| 2149 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoS65ECDcmP |
| 2150 | phosphohydrolase | |||
| 3543 | Fis DNA-binding transcriptional dual regulator | |||
| 3544 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoS65ECORF3544P |
| 3545 | membrane protein | |||
| 3660 | ribulose-5-phosphate 3-epimerase | |||
| 3661 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoS65ECDamP |
| 3662 | cell division protein DamX | |||
| 4576 | 118 aa hypothetical protein | |||
| 4577 | M | M.EcosS3ORF15775P (100% identity) | M.EcoS65ECORF4577P | |
| 4578 | sensory histidine kinase DcuS | |||
| 4832 | 141 aa hypothetical protein | |||
| 4833 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M1.EcoS65ECORF4833P |
| 4834 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M2.EcoS65ECORF4833P |
| 4835 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoS65ECORF4833P |
| 4836 | 5-methylcytosine-specific restriction enzyme | |||
| plasmid pS65EC | ||||
| 42 | YccB | |||
| 43 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoS65ECORF43P |
| 44 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4835 | Type II restriction endonuclease | |||
| 4836 | R | EcosS9McrCP (100% identity) | EcoS65ECMcrCP | |
| 4837 | R | EcosS3McrBP (100% identity) | EcoS65ECMcrBP | |
| 4838 | glycosyl transferase | |||