Aggregatibacter aphrophilus C2008001229 |
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Putative Aggregatibacter aphrophilus C2008001229 RM systems
Ref: Nichols,M. et al. unpublished
REBASE ref # 28250
Contig set: 2,288,398 bp
GenBank #: QEPV00000000 (NZ_QEPV00000000)
REBASE acronym: Aap1229
Org_num: 33544
All begin DPW01_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 8375 | MarC family protein | |||
| 8380 | R | Aph11096IIP (100% identity) | Aap1229ORF8400P | |
| 8385 | S | S2.Aph11096II (97% identity) | S1.Aap1229ORF8400P | |
| 8390 | S | S1.Aph11096II (88% identity) | S2.Aap1229ORF8400P | |
| 8395 | anticodon nuclease | |||
| 8400 | M | M.Aph11096II (100% identity) | M.Aap1229ORF8400P | |
| 8405 | tryptophan--tRNA ligase | |||
| 470 | ribonucleoside-diphosphate reductase subunit | |||
| 475 | R | Aph11096IP (100% identity) | Aap1229ORF500P | |
| 480 | hydroxyacid dehydrogenase | |||
| 485 | transposase | |||
| 490 | S | S.HpaHP01ORFHP (41% identity) | S1.Aap1229ORF500P | |
| 495 | S | S1.Aph11096I (96% identity) | S2.Aap1229ORF500P | |
| 500 | M | M.Aph11096I (100% identity) | M.Aap1229ORF500P | |
| 505 | recombinase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6925 | DUF87 domain-containing protein | |||
| 6930 | M | M.Aph11096ORF1954P (100% identity) | M.Aap1229ORF6930P | |
| 6935 | CRISPR-associated helicase Cas3 | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4265 | rhodanese-like domain-containing protein | |||
| 4270 | M | M.Aph11096III (100% identity) | GATC | M.Aap1229ORF4270P |
| 4275 | 3-dehydroquinate synthase | |||