Plesiomonas shigelloides FM82 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Plesiomonas shigelloides FM82 RM systems
Ref: Fontana,H.Y.Y. et al. unpublished
REBASE ref # 28207
Contig set: 3,725,886 bp
GenBank #: PYSI00000000 (NZ_PYSI00000000)
REBASE acronym: PshFM82
Org_num: 33515
All begin C9E85_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 15865 | WYL domain-containing protein | |||
| 15870 | M | M.SdeS12ORF3089P (89% identity) | M.PshFM82ORF15870P | |
| 15875 | S | S.EbaB14ORFAP (46% identity) | S.PshFM82ORF15870P | |
| 15560 | 319 aa hypothetical protein | |||
| 15565 | R | Psh17188ORF13180P (98% identity) | PshFM82ORF15580P | |
| 15570 | cell filamentation protein Fic | |||
| 15575 | S | S.Bmu1640ORF26255P (56% identity) | S.PshFM82ORF15580P | |
| 15580 | M | type I restriction-modification system subunit | M.PshFM82ORF15580P | |
| 14965 | restriction endonuclease | |||
| 14970 | R | Vfl0110ORFBP (91% identity) | PshFM82ORF14970P | |
| 14975 | S | S.Bcp4100ORF1973P (20% identity) | S.PshFM82ORF14970P | |
| 1820 | transcriptional regulator | |||
| 1825 | M | M.Eic2234ORF9680P (97% identity) | M.PshFM82ORF1825P | |
| 1830 | S | S.Esp368ORF18160P (48% identity) | S.PshFM82ORF1825P | |
| 1835 | 483 aa hypothetical protein | |||
| 1845 | DNA helicase UvrD | |||
| 1850 | R | Eic2234ORF9680P (97% identity) | PshFM82ORF1850P | |
| 1855 | M48 family peptidase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 16090 | 127 aa hypothetical protein | |||
| 16095 | R | Psh10364ORF205P (96% identity) | PshFM82ORF16095P | |
| 16100 | 171 aa hypothetical protein | |||
| 12140 | ATP-dependent helicase | |||
| 12145 | RM | AdhIF1ORF6805P (80% identity) | PshFM82ORF12145P | |
| 12150 | restriction endonuclease | |||
| 13975 | 174 aa hypothetical protein | |||
| 13980 | M | M.Psh725ORF11365P (92% identity) | M.PshFM82ORF13980P | |
| 13985 | 67 aa hypothetical protein | |||
| 9490 | ribulose-phosphate 3-epimerase | |||
| 9495 | M | M.PshC13DamP (100% identity) | M.PshFM82DamP | |
| 9500 | 563 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5890 | ImmA/IrrE family metallo-endopeptidase | |||
| 5895 | R | Sal150735ORF20660P (99% identity) | PshFM82ORF5900P | |
| 5900 | M | M.Vna16374II (84% identity) | M.PshFM82ORF5900P | |
| 5905 | 312 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 14960 | 355 aa hypothetical protein | |||
| 14965 | R | Vsp1107MrrP (95% identity) | PshFM82MrrP | |
| 14970 | DEAD/DEAH box helicase | |||