Escherichia coli U15A |
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Putative Escherichia coli U15A RM systems
Ref: Forde,B.M. et al. unpublished
REBASE ref # 28281
| Sequence length: | GenBank #: | |
| Chromosome: | 4,928,938 bp | CP035720 |
| plasmid pU15A_A: | 109,023 bp | CP035721 |
| plasmid pU15A_B: | 69,541 bp | CP035722 |
REBASE acronym: EcoU15A
Org_num: 33658
All begin U15A_, U15A_A, U15A_B
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3571 | 156 aa hypothetical protein | |||
| 3572 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoU15AORF3573P |
| 3573 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoU15AORF3573P |
| 3574 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoU15AORF3573P |
| 3575 | 260 aa hypothetical protein | |||
| 3219 | Toxic protein SymE | |||
| 3220 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | EcoU15AORF3222P |
| 3221 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.EcoU15AORF3222P |
| 3222 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.EcoU15AORF3222P |
| 3223 | Mrr restriction system protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4254 | 71 aa hypothetical protein | |||
| 4255 | M | M.KpnYN1ORFGP (89% identity) | M.EcoU15AORF4255P | |
| 4256 | HTH-type transcriptional regulator ImmR | |||
| 4699 | 65 aa hypothetical protein | |||
| 4700 | M | M.EcosS9ORF10680P (100% identity) | A | M.EcoU15AORF4700P |
| 4703 | Anti-adapter protein IraM | |||
| 654 | inner membrane transporter YedA | |||
| 655 | V | V.SflC32DcmP (74% identity) | V.EcoU15ADcmP | |
| 656 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoU15ADcmP |
| 657 | 231 aa hypothetical protein | |||
| 2040 | DNA-binding protein Fis | |||
| 2041 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoU15AORF2041P |
| 2042 | 59 aa hypothetical protein | |||
| 2160 | Ribulose-phosphate 3-epimerase | |||
| 2161 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoU15ADamP |
| 2162 | Cell division protein DamX | |||
| 3152 | 141 aa hypothetical protein | |||
| ??? | M | M2.EcosEC4ORF20110P (100% identity) | GGTCTC | M1.EcoU15AORF3153P |
| 3154 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M2.EcoU15AORF3153P |
| 3155 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoU15AORF3153P |
| 3156 | 428 aa hypothetical protein | |||
| plasmid pU15A_A | ||||
| 123 | 73 aa hypothetical protein | |||
| 122 | M | M.SspPIBORF23080P (100% identity) | M.EcoU15AORF122P | |
| 121 | 70 aa hypothetical protein | |||
| plasmid pU15A_B | ||||
| 7 | 73 aa hypothetical protein | |||
| 8 | M | M.Sfl7ORF23565P (100% identity) | M.EcoU15AORF8P | |
| 9 | 308 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3155 | 579 aa hypothetical protein | |||
| ??? | R | EcoU14AMcrCP (100% identity) | EcoU15AMcrCP | |
| 3157 | R | EcosS3McrBP (100% identity) | EcoU15AMcrBP | |
| 3158 | teichuronic acid biosynthesis | |||