Shigella flexneri SFL1520 |
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Putative Shigella flexneri SFL1520 RM systems
Ref: Parajuli,P. et al. Genome Biol Evol (2019) In press
REBASE ref # 28318
Complete sequence: 4,575,536 bp
GenBank #: CP032513
REBASE acronym: Sfl1520
Org_num: 33670
All begin D6T62_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 23870 | endoribonuclease SymE | |||
| 23875 | S | S.SflPE577ORF23095P (100% identity) | GTANNNNNNNNGTCY | S.Sfl1520ORF23880P |
| 23880 | M | M.SspS13ORF3945P (99% identity) | GTANNNNNNNNGTCY | M.Sfl1520ORF23880P |
| 23885 | R | SflTORF4636P (99% identity) | GTANNNNNNNNGTCY | Sfl1520ORF23880P |
| 23890 | IS1 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1430 | PerC family transcriptional regulator | |||
| 1435 | M | M.SflLIN17ORF17440P (99% identity) | GATC | M.Sfl1520ORF1435P |
| 1440 | LexA family transcriptional regulator | |||
| 5975 | phosphohydrolase | |||
| 5980 | M | M.SflTDcmP (100% identity) | CCWGG | M.Sfl1520DcmP |
| 5985 | V | V.SflTDcmP (100% identity) | V.Sfl1520DcmP | |
| 5990 | drug/metabolite exporter YedA | |||
| 18095 | Fis family transcriptional regulator | |||
| 18100 | M | M.Sfl888048ORF2305P (100% identity) | ATGCAT | M.Sfl1520ORF18100P |
| 18105 | DUF2556 domain-containing protein | |||
| 18660 | ribulose-phosphate 3-epimerase | |||
| 18665 | M | M.SflTDamP (100% identity) | GATC | M.Sfl1520DamP |
| 18670 | cell division protein DamX | |||