Spirochaeta perfilievii P |
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Putative Spirochaeta perfilievii P RM systems
Ref: Leshcheva,N. and Mikheeva,N. unpublished
REBASE ref # 30172
| Sequence length: | GenBank #: | |
| Chromosome: | 3,667,739 bp | CP035807 |
| plasmid pSpe: | 32,844 bp | CP035808 |
REBASE acronym: Spe19205
Org_num: 30051
All begin EW093_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1175 | 1034 aa hypothetical protein | |||
| 1180 | R | Sze1ORF12570P (80% identity) | TATAYNNNNNGTG | Spe19205IIIP |
| 1185 | S | S2.Pga1313ORF4740P (68% identity) | S2.Spe19205IIIP | |
| 1190 | S | S.Lsp002ORFDP (49% identity) | TATAYNNNNNGTG | S1.Spe19205III |
| 1195 | M | M.Sca3403I (85% identity) | TATAYNNNNNGTG | M.Spe19205III |
| 1200 | DNA recombination protein RmuC | |||
| 10935 | 157 aa hypothetical protein | |||
| 10940 | M | M.CsocetoORF16325P (74% identity) | M.Spe19205ORF10940P | |
| 10945 | R | DspB569ORF706P (15% identity) | Spe19205ORF10940P | |
| 10950 | S | S.PalBLR1ORF14624P (21% identity) | S.Spe19205ORF10940P | |
| 10955 | 98 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7650 | methyl-accepting chemotaxis protein | |||
| 7655 | M | 495 aa hypothetical protein | TTATAA | M.Spe19205V |
| 7660 | MFS transporter | |||
| 8610 | 86 aa hypothetical protein | |||
| 8615 | RM | PpaD9ORF8040P (69% identity) | GGACY | Spe19205IV |
| 8620 | M | M2.PbaD3ORF1683P (63% identity) | GGACY | M2.Spe19205IV |
| 8625 | M | M1.Hur55ORFCP (58% identity) | GGACY | M1.Spe19205IV |
| 8630 | integrase | |||
| plasmid pSpe | ||||
| 17085 | 568 aa hypothetical protein | |||
| ??? | M | M2.EhiT161ORF1700P (47% identity) | M.Spe19205ORF17090P | |
| 17095 | DNA cytosine methyltransferase | |||
| 17090 | helix-turn-helix domain-containing protein | |||
| 17095 | M | M.Pda39429ORF11890P (19% identity) | M.Spe19205ORF17095P | |
| 17100 | DUF1016 domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1435 | class I SAM-dependent methyltransferase | |||
| 1440 | R | FbaSM2FORFCP (46% identity) | Spe19205ORF1440P | |
| 1445 | (deoxy)nucleoside triphosphate | |||