Escherichia coli Ec-2Lar |
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Putative Escherichia coli Ec-2Lar RM systems
Ref: Papagiannitsis,C. and Petinaki,E. unpublished
REBASE ref # 28295
Complete sequence: 5,027,515 bp
GenBank #: CP035318
REBASE acronym: Eco2Lar
Org_num: 33606
All begin ETE41_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5225 | M48 family peptidase | |||
| 5230 | R | Ecos142ORF9685P (100% identity) | GATGNNNNNNTAC | Eco2LarORF5250P |
| 5235 | cold shock domain-containing protein | |||
| 5240 | YecA family protein | |||
| 5245 | S | S.Ecos142ORF9685P (100% identity) | GATGNNNNNNTAC | S.Eco2LarORF5250P |
| 5250 | M | M.Ecos142ORF9685P (100% identity) | GATGNNNNNNTAC | M.Eco2LarORF5250P |
| 5255 | IS3 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5510 | drug/metabolite exporter YedA | |||
| 5515 | V | V.Ecos142DcmP (100% identity) | V.Eco2LarDcmP | |
| 5520 | M | M.Ecos142DcmP (100% identity) | CCWGG | M.Eco2LarDcmP |
| 5525 | phosphohydrolase | |||
| 13760 | ribulose-phosphate 3-epimerase | |||
| 13765 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco2LarDamP |
| 13770 | cell division protein DamX | |||
| 17725 | PerC family transcriptional regulator | |||
| 17730 | M | M.SdyFF10ORF21495P (100% identity) | GATC | M.Eco2LarORF17730P |
| 17735 | LexA family transcriptional regulator | |||
| 21170 | PerC family transcriptional regulator | |||
| 21175 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco2LarORF21175P |
| 21180 | LexA family transcriptional regulator | |||
| 21210 | 67 aa hypothetical protein | |||
| 21215 | M | M.Ecos142ORF20090P (100% identity) | M.Eco2LarORF21215P | |
| 21220 | phage lysis protein EssD | |||
| 24205 | TraR/DksA family transcriptional regulator | |||
| 24210 | M | M.SspS13ORF8710P (100% identity) | GATC | M.Eco2LarORF24210P |
| 24215 | replication endonuclease | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 19295 | IS1 family transposase | |||
| 19300 | R | SflN116ORF19490P (77% identity) | Eco2LarORF19300P | |
| 19305 | 100 aa hypothetical protein | |||