Escherichia coli Ec-20Lar |
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Putative Escherichia coli Ec-20Lar RM systems
Ref: Papagiannitsis,C. and Petinaki,E. unpublished
REBASE ref # 28295
Complete sequence: 5,083,560 bp
GenBank #: CP035317
REBASE acronym: Eco20Lar
Org_num: 33607
All begin EQ191_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 21325 | IS3 family transposase | |||
| 21330 | M | M.Ecos142ORF9685P (100% identity) | GATGNNNNNNTAC | M.Eco20LarORF21330P |
| 21335 | S | S.Ecos142ORF9685P (100% identity) | GATGNNNNNNTAC | S.Eco20LarORF21330P |
| 21340 | YecA family protein | |||
| 21345 | cold shock domain-containing protein | |||
| 21350 | R | Ecos142ORF9685P (100% identity) | GATGNNNNNNTAC | Eco20LarORF21330P |
| 21355 | M48 family peptidase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2360 | replication endonuclease | |||
| 2365 | M | M.SspS13ORF8710P (100% identity) | GATC | M.Eco20LarORF2365P |
| 2370 | TraR/DksA family transcriptional regulator | |||
| 5355 | phage lysis protein EssD | |||
| 5360 | M | M.Ecos142ORF20090P (100% identity) | M.Eco20LarORF5360P | |
| 5365 | 67 aa hypothetical protein | |||
| 5395 | LexA family transcriptional regulator | |||
| 5400 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco20LarORF5400P |
| 5405 | PerC family transcriptional regulator | |||
| 8845 | LexA family transcriptional regulator | |||
| 8850 | M | M.SdyFF10ORF21495P (100% identity) | GATC | M.Eco20LarORF8850P |
| 8855 | PerC family transcriptional regulator | |||
| 12815 | cell division protein DamX | |||
| 12820 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco20LarDamP |
| 12825 | ribulose-phosphate 3-epimerase | |||
| 13350 | DUF2556 domain-containing protein | |||
| 13355 | M | M.Ecos142ORF2405P (100% identity) | ATGCAT | M.Eco20LarORF13355P |
| 13360 | DNA-binding transcriptional regulator Fis | |||
| 21055 | phosphohydrolase | |||
| 21060 | M | M.Ecos142DcmP (100% identity) | CCWGG | M.Eco20LarDcmP |
| 21065 | V | V.Ecos142DcmP (100% identity) | V.Eco20LarDcmP | |
| 21070 | drug/metabolite exporter YedA | |||
| 24830 | 108 aa hypothetical protein | |||
| 24845 | M | M.SsoL4094ORF17545P (100% identity) | A | M.Eco20LarORF24845P |
| 24850 | TrmB family transcriptional regulator | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7275 | 100 aa hypothetical protein | |||
| 7280 | R | SflN116ORF19490P (77% identity) | Eco20LarORF7280P | |
| 7285 | IS1 family transposase | |||