Salmonella enterica FORC_078 |
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Putative Salmonella enterica FORC_078 RM systems
Ref: Hwang,B.K. et al. unpublished
REBASE ref # 28287
Complete sequence: 4,686,022 bp
GenBank #: CP026713
REBASE acronym: Sen078
Org_num: 33590
All begin FORC78_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2570 | 90 aa hypothetical protein | |||
| 2571 | M | M.StySBLI (100% identity) | GGYANNNNNNTCG | M.Sen078ORF2571P |
| 2572 | S | S.StySBLI (100% identity) | GGYANNNNNNTCG | S.Sen078ORF2571P |
| 2573 | R | StySBLI (100% identity) | GGYANNNNNNTCG | Sen078ORF2571P |
| 2574 | 306 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 535 | 157 aa hypothetical protein | |||
| 536 | M | M.Ssp89ORF1824P (100% identity) | M.Sen078ORF536P | |
| 537 | Holliday junction resolvase / Crossover junction | |||
| 1477 | Permease of the drug/metabolite transporter | |||
| 1478 | V | Very-short-patch mismatch repair endonuclease | V.Sen078DcmP | |
| 1479 | M | M.SspZ69DcmP (100% identity) | CCWGG | M.Sen078DcmP |
| 1480 | metal-dependent phosphohydrolase | |||
| 3534 | DamX, an inner membrane protein involved in bile | |||
| 3535 | M | Methyl-directed repair DNA adenine methylase | GATC | M.Sen078DamP |
| 3536 | Ribulose-phosphate 3-epimerase | |||
| 3626 | 54 aa hypothetical protein | |||
| 3627 | M | Adenine-specific methyltransferase | ATGCAT | M.Sen078ORF3627P |
| 3628 | DNA-binding protein Fis | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2157 | Cytochrome bd2, subunit I | |||
| 2158 | R | SspSAL045ORF17295P (99% identity) | CAGAG | Sen078ORF2159P |
| 2159 | M | M.SspSAL045ORF17295P (100% identity) | CAGAG | M.Sen078ORF2159P |
| 2160 | metabolite transport protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2567 | Type I restriction-modification system | |||
| ??? | R | SenSL913MrrP (100% identity) | Sen078MrrP | |
| 2570 | 90 aa hypothetical protein | |||