Klebsiella pneumoniae NH34 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Klebsiella pneumoniae NH34 RM systems
Ref: Mongkhun,A. et al. unpublished
REBASE ref # 28290
| Sequence length: | GenBank #: | |
| Chromosome: | 5,427,547 bp | CP034408 |
| plasmid pNH34.1: | 300,327 bp | CP034406 |
| plasmid pNH34.2: | 103,210 bp | CP034407 |
REBASE acronym: KpnNH34
Org_num: 33595
All begin EJC76_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18780 | 400 aa hypothetical protein | |||
| 18785 | M | M.Sma1978ORFBP (100% identity) | ACGNNNNNGTTG | M.KpnNH34ORF18785P |
| 18790 | anticodon nuclease | |||
| 18795 | S | S.Sma1978ORFBP (100% identity) | ACGNNNNNGTTG | S.KpnNH34ORF18785P |
| 18800 | ATP-dependent DNA helicase RecG | |||
| 18805 | histidinol-phosphatase | |||
| 18810 | R | Sma1978ORFBP (100% identity) | ACGNNNNNGTTG | KpnNH34ORF18785P |
| 18815 | DNA-binding protein | |||
| 23205 | DUF4102 domain-containing protein | |||
| 23210 | R | Ksp1954ORF11460P (99% identity) | ACANNNNNNNNTGAC | KpnNH34ORF23215P |
| 23215 | M | M.Ksp1954ORF11460P (100% identity) | ACANNNNNNNNTGAC | M.KpnNH34ORF23215P |
| 23220 | S | S.Ksp1954ORF11460P (100% identity) | ACANNNNNNNNTGAC | S.KpnNH34ORF23215P |
| plasmid pNH34.2 | ||||
| 2250 | IS1 family transposase | |||
| 2255 | M | M.SmaQC11ORF51970P (100% identity) | GATGNNNNNNTTG | M.KpnNH34ORF2255P |
| 2260 | S | S.Kva2757ORF27000P (100% identity) | GATGNNNNNNTTG | S.KpnNH34ORF2255P |
| 2265 | YecA family protein | |||
| 2270 | R | SmaQC11ORF51970P (100% identity) | GATGNNNNNNTTG | KpnNH34ORF2255P |
| 2275 | M48 family peptidase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3435 | 75 aa hypothetical protein | |||
| 3440 | M | M.Kpnst68ORF1125P (100% identity) | M.KpnNH34ORF3440P | |
| 3445 | replication endonuclease | |||
| 5250 | helix-turn-helix domain-containing protein | |||
| 5255 | M | M.KpnR886ORF15395P (100% identity) | M.KpnNH34ORF5255P | |
| 5260 | RusA family crossover junction | |||
| 10485 | exonuclease | |||
| 10490 | M | M.Kpnst68ORF20290P (100% identity) | M.KpnNH34ORF10490P | |
| 10495 | 74 aa hypothetical protein | |||
| 10760 | drug/metabolite exporter YedA | |||
| 10765 | V | V.KspC31DcmP (75% identity) | V.KpnNH34DcmP | |
| 10770 | DNA cytosine methyltransferase | |||
| 10765 | very short patch repair endonuclease | |||
| 10770 | M | M.Ksp1954ORF23690P (100% identity) | CCWGG | M.KpnNH34ORF10770P |
| 10775 | phosphohydrolase | |||
| 18260 | ribulose-phosphate 3-epimerase | |||
| 18265 | M | M.Kpnst68DamP (100% identity) | GATC | M.KpnNH34DamP |
| 18270 | cell division protein DamX | |||
| plasmid pNH34.1 | ||||
| 525 | resolvase | |||
| 530 | R | YpsR1ORFAP (99% identity) | CCWGG | KpnNH34ORF535P |
| 535 | M | M.YpsR2ORFAP (100% identity) | CCWGG | M.KpnNH34ORF535P |
| 540 | IS1 family transposase | |||
| 760 | 1126 aa hypothetical protein | |||
| 765 | M | M.Kqu610ORF26075P (100% identity) | M.KpnNH34ORF765P | |
| 770 | 170 aa hypothetical protein | |||
| 835 | 82 aa hypothetical protein | |||
| 840 | R | Kpnst68ORF27050P (100% identity) | KpnNH34ORF845P | |
| 845 | M | M.Kqu645ORF52040P (100% identity) | M.KpnNH34ORF845P | |
| 850 | DNA replication protein DnaC | |||