Escherichia coli CRE10 |
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Putative Escherichia coli CRE10 RM systems
Ref: Phannachet,K. et al. unpublished
REBASE ref # 28286
| Sequence length: | GenBank #: | |
| Chromosome: | 4,931,251 bp | CP034404 |
| plasmid pCRE10.1: | 134,611 bp | CP034401 |
| plasmid pCRE10.2: | 92,446 bp | CP034402 |
REBASE acronym: EcoCRE10
Org_num: 33600
All begin EJC75_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3870 | M48 family peptidase | |||
| 3875 | R | Sbo49812IP (100% identity) | YTCANNNNNNGTTY | EcoCRE10ORF3895P |
| 3880 | Appr-1-p processing protein | |||
| 3885 | DUF4433 domain-containing protein | |||
| 3890 | S | S.EcosE2ORF13465P (100% identity) | YTCANNNNNNGTTY | S.EcoCRE10ORF3895P |
| 3895 | M | M.EcosE2ORF13465P (100% identity) | YTCANNNNNNGTTY | M.EcoCRE10ORF3895P |
| 3900 | transcription factor | |||
| plasmid pCRE10.1 | ||||
| 345 | IS1 family transposase | |||
| 350 | R | EcosR11ORF25685P (100% identity) | CAAYNNNNNNCTGG | EcoCRE10ORF360P |
| 355 | S | S.SenceORFJP (100% identity) | CAAYNNNNNNCTGG | S.EcoCRE10ORF360P |
| 360 | M | M.KpnKPA1ORF26345P (100% identity) | CAAYNNNNNNCTGG | M.EcoCRE10ORF360P |
| 365 | type II toxin-antitoxin system Phd/YefM family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 8565 | EamA family transporter | |||
| 8570 | V | V.SsoSE61DcmP (100% identity) | V.EcoCRE10DcmP | |
| 8575 | M | M.EcoVCSW8DcmP (100% identity) | CCWGG | M.EcoCRE10DcmP |
| 8580 | phosphohydrolase | |||
| 15550 | DNA-binding transcriptional regulator Fis | |||
| 15555 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcoCRE10ORF15555P |
| 15560 | DUF2556 domain-containing protein | |||
| 16105 | ribulose-phosphate 3-epimerase | |||
| 16110 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoCRE10DamP |
| 16115 | cell division protein DamX | |||
| 23330 | PerC family transcriptional regulator | |||
| 23335 | M | M.EcoCRE1ORF17795P (100% identity) | GATC | M.EcoCRE10ORF23335P |
| 23340 | LexA family transcriptional regulator | |||
| 23370 | TrmB family transcriptional regulator | |||
| 23375 | M | M.EcoCRE1ORF17835P (100% identity) | M.EcoCRE10ORF23375P | |
| 23380 | holin | |||
| plasmid pCRE10.1 | ||||
| 235 | 73 aa hypothetical protein | |||
| 240 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoCRE10ORF240P |
| 245 | 0 aa hypothetical protein | |||
| plasmid pCRE10.2 | ||||
| 995 | 149 aa hypothetical protein | |||
| 1000 | M | M.Sma1978ORFAP (97% identity) | M.EcoCRE10ORF1000P | |
| 1005 | 120 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2510 | TraR/DksA family transcriptional regulator | |||
| 2515 | M | M.EcoTCMB2ORF10935P (100% identity) | GATC | M.EcoCRE10ORF2515P |
| 2520 | replication endonuclease | |||