Escherichia coli NissleGFP_pZE21 |
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Putative Escherichia coli NissleGFP_pZE21 RM systems
Ref: Crook,N.C. et al. unpublished
REBASE ref # 28283
Complete sequence: 5,055,966 bp
GenBank #: CP035486
REBASE acronym: EcoZE21
Org_num: 33582
All begin EUJ32_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 24590 | endoribonuclease SymE | |||
| 24595 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | EcoZE21ORF24605P |
| 24600 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.EcoZE21ORF24605P |
| 24605 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.EcoZE21ORF24605P |
| 24610 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10260 | holin | |||
| 10265 | M | M.EcoWS38ORF1290P (100% identity) | M.EcoZE21ORF10265P | |
| 10270 | TrmB family transcriptional regulator | |||
| 10300 | RusA family crossover junction | |||
| ??? | M | M.Eco8802ORFFP (100% identity) | M.EcoZE21ORF10305P | |
| 10310 | GntR family transcriptional regulator | |||
| 10825 | drug/metabolite exporter YedA | |||
| 10830 | V | V.EcosC25DcmP (100% identity) | V.EcoZE21DcmP | |
| 10835 | M | M.SflC32DcmP (100% identity) | CCWGG | M.EcoZE21DcmP |
| 10840 | phosphohydrolase | |||
| 18350 | DNA-binding transcriptional regulator Fis | |||
| 18355 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoZE21ORF18355P |
| 18360 | DUF2556 domain-containing protein | |||
| 18950 | ribulose-phosphate 3-epimerase | |||
| 18955 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoZE21DamP |
| 18960 | cell division protein DamX | |||
| 24230 | IS3 family transposase | |||
| 24235 | M | M2.EcosEC4ORF20110P (100% identity) | GGTCTC | M1.EcoZE21ORF24235P |
| 24240 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M2.EcoZE21ORF24235P |
| 24245 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoZE21ORF24235P |
| 24250 | restriction endonuclease | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6580 | recombination protein NinB | |||
| 6585 | M | M.EcosC25ORF16305P (100% identity) | GATC | M.EcoZE21ORF6585P |
| 6590 | NinE family protein | |||