Salmonella enterica subsp. enterica CFSA122 |
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Putative Salmonella enterica subsp. enterica CFSA122 RM systems
Ref: Hu,Y. et al. unpublished
REBASE ref # 28272
| Sequence length: | GenBank #: | |
| Chromosome: | 4,990,577 bp | CP033226 |
| plasmid pCFSA122-1: | 181,747 bp | CP033224 |
| plasmid pCFSA122-2: | 6,758 bp | CP033225 |
REBASE acronym: Sen122
Org_num: 33480
All begin EBF18_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 22625 | restriction endonuclease | |||
| 22630 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen122ORF22635P |
| 22635 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen122ORF22635P |
| 22640 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen122ORF22635P |
| 22645 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2950 | cell division protein DamX | |||
| 2955 | M | adenine-specific DNA-methyltransferase | GATC | M.Sen122DamP |
| 2960 | ribulose-phosphate 3-epimerase | |||
| 3460 | DUF2556 domain-containing protein | |||
| 3465 | M | adenine-specific DNA-methyltransferase | ATGCAT | M.Sen122ORF3465P |
| 3470 | DNA-binding transcriptional regulator Fis | |||
| 4420 | DUF2732 family protein | |||
| 4425 | M | M.SensSZL38ORF19965P (100% identity) | M.Sen122ORF4425P | |
| 4430 | replication endonuclease | |||
| 6985 | AraC family transcriptional regulator | |||
| 6990 | M | M.StyCORF187P (49% identity) | M.Sen122ORF6990P | |
| 6995 | thermonuclease family protein | |||
| 7670 | ead/Ea22-like family protein | |||
| 7675 | M | M.StyTORF1914P (100% identity) | M.Sen122ORF7675P | |
| 7680 | 0 aa hypothetical protein | |||
| 11205 | PerC family transcriptional regulator | |||
| 11210 | M | M.Ssp17155ORFIP (100% identity) | M.Sen122ORF11210P | |
| 11215 | RusA family crossover junction | |||
| 11465 | phosphohydrolase | |||
| 11470 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen122DcmP |
| 11475 | V | very short patch repair endonuclease | V.Sen122DcmP | |
| 11480 | drug/metabolite exporter YedA | |||
| 22805 | BREX system P-loop protein BrxC | |||
| 22810 | RM | StyUK1IV (100% identity) | GATCAG | Sen122ORF22810P |
| 22815 | ATP-binding protein | |||
| plasmid pCFSA122-1 | ||||
| 130 | DUF1173 domain-containing protein | |||
| 135 | M | M.YpsF1ORFCP (100% identity) | M.Sen122ORF135P | |
| 140 | thermonuclease family protein | |||
| 360 | 284 aa hypothetical protein | |||
| 365 | M | M.YpsF1ORFDP (100% identity) | M.Sen122ORF365P | |
| 370 | DNA-binding protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20025 | 33 aa hypothetical protein | |||
| 20030 | R | StyUK1IP (99% identity) | CAGAG | Sen122ORF20035P |
| 20035 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen122ORF20035P |
| 20040 | MFS transporter | |||
| plasmid pCFSA122-2 | ||||
| ??? | M | M.Sen7230ORF24715P (96% identity) | M.Sen122ORF1040P | |
| 1055 | R | Sen7230ORF24715P (94% identity) | Sen122ORF1040P | |
| 1060 | 0 aa hypothetical protein | |||
| 26715 | M | M.Sen7230ORF24715P (99% identity) | M.Sen122ORF26715P | |
| 1055 | R | Sen7230ORF24715P (100% identity) | Sen122ORF26715P | |
| 1060 | 0 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 22620 | BrnT family toxin | |||
| 22625 | R | StyUK1MrrP (100% identity) | Sen122MrrP | |
| 22630 | type I restriction-modification system | |||