Salmonella enterica subsp. enterica CFSA12 |
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Putative Salmonella enterica subsp. enterica CFSA12 RM systems
Ref: Hu,Y. et al. unpublished
REBASE ref # 28272
| Sequence length: | GenBank #: | |
| Chromosome: | 4,991,162 bp | CP033257 |
| plasmid pCFSA12: | 147,918 bp | CP033256 |
REBASE acronym: SenA12
Org_num: 33481
All begin EB535_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 22375 | restriction endonuclease | |||
| 22380 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | SenA12ORF22385P |
| 22385 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.SenA12ORF22385P |
| 22390 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.SenA12ORF22385P |
| 22395 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2690 | cell division protein DamX | |||
| 2695 | M | M.StyTDamP (100% identity) | GATC | M.SenA12DamP |
| 2700 | ribulose-phosphate 3-epimerase | |||
| 3200 | DUF2556 domain-containing protein | |||
| 3205 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenA12ORF3205P |
| 3210 | DNA-binding transcriptional regulator Fis | |||
| 4160 | DUF2732 family protein | |||
| 4165 | M | M.SensSZL38ORF19965P (100% identity) | M.SenA12ORF4165P | |
| 4170 | replication endonuclease | |||
| 6890 | thermonuclease family protein | |||
| 6895 | M | M.StyCORF187P (49% identity) | M.SenA12ORF6895P | |
| 6900 | AraC family transcriptional regulator | |||
| 7425 | ead/Ea22-like family protein | |||
| 7430 | M | M.StyTORF1914P (100% identity) | M.SenA12ORF7430P | |
| 7435 | 0 aa hypothetical protein | |||
| 10960 | PerC family transcriptional regulator | |||
| 10965 | M | M.Ssp17155ORFIP (100% identity) | M.SenA12ORF10965P | |
| 10970 | RusA family crossover junction | |||
| 11220 | phosphohydrolase | |||
| 11225 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.SenA12DcmP |
| 11230 | V | V.StyUK1DcmP (100% identity) | V.SenA12DcmP | |
| 11235 | drug/metabolite exporter YedA | |||
| 22555 | BREX system P-loop protein BrxC | |||
| 22560 | RM | StyUK1IV (100% identity) | GATCAG | SenA12ORF22560P |
| 22565 | ATP-binding protein | |||
| plasmid pCFSA12 | ||||
| 385 | 284 aa hypothetical protein | |||
| 390 | M | M.YpsF1ORFDP (100% identity) | M.SenA12ORF390P | |
| 395 | DNA-binding protein | |||
| 625 | thermonuclease family protein | |||
| 630 | M | M.YpsF1ORFCP (100% identity) | M.SenA12ORF630P | |
| 635 | DUF1173 family protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19780 | 33 aa hypothetical protein | |||
| 19785 | R | StyUK1IP (99% identity) | CAGAG | SenA12ORF19790P |
| 19790 | M | M.StyUK1I (100% identity) | CAGAG | M.SenA12ORF19790P |
| 19795 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 22370 | BrnT family toxin | |||
| 22375 | R | StyUK1MrrP (100% identity) | SenA12MrrP | |
| 22380 | type I restriction-modification system | |||