Mycoplasma fermentans NCTC10117 |
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Putative Mycoplasma fermentans NCTC10117 RM systems
Ref:
REBASE ref # 22501
| Sequence length: | GenBank #: | |
| chromosome 1: | 561,287 bp | LR214955 |
| chromosome 8: | 1,278,744 bp | LR214962 |
| plasmid 11: | 106,462 bp | LR214965 |
| plasmid 2: | 15,149 bp | LR214956 |
| plasmid 4: | 13,843 bp | LR214958 |
| plasmid 5: | 17,427 bp | LR214959 |
| plasmid 6: | 10,949 bp | LR214960 |
| plasmid 7: | 11,770 bp | LR214961 |
| plasmid 9: | 266,464 bp | LR214963 |
REBASE acronym: Mfe10117
Org_num: 33436
All begin NCTC10117_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| plasmid 11 | ||||
| 2126 | T5orf172 domain | |||
| 2127 | S | S1.Mfe64ORF570P (100% identity) | S1.Mfe10117ORF2127P | |
| 2128 | S | S2.Mfe64ORF570P (100% identity) | S2.Mfe10117ORF2127P | |
| 2129 | Tyrosine recombinase XerC | |||
| 2130 | S | S2.Mfe10117ORF593P (100% identity) | S3.Mfe10117ORF2127P | |
| 2131 | S | S2.Mfe18ORF488P (97% identity) | S4.Mfe10117ORF2127P | |
| 2132 | repb | |||
| plasmid 2 | ||||
| 513 | S | Uncharacterised protein | S1.Mfe10117ORF513P | |
| 514 | S | type i restriction-modification system, s | S2.Mfe10117ORF513P | |
| 515 | S | S3.Mco10147ORF891P (91% identity) | S3.Mfe10117ORF513P | |
| 516 | Tyrosine recombinase XerC | |||
| 517 | S | S2.Mfe64ORF570P (100% identity) | S4.Mfe10117ORF513P | |
| 518 | S | S1.Mfe64ORF570P (70% identity) | S5.Mfe10117ORF513P | |
| 519 | repb | |||
| plasmid 4 | ||||
| ??? | R | Mfe10117ORF88P (100% identity) | Mfe10117ORF551P | |
| 551 | M | M.MfeJERORF8340P (100% identity) | M.Mfe10117ORF551P | |
| ??? | S | restriction endonuclease subunit S | S1.Mfe10117ORF551P | |
| 553 | S | S2.Mfe10117ORF88P (100% identity) | S2.Mfe10117ORF551P | |
| 554 | S | Uncharacterised protein | S3.Mfe10117ORF551P | |
| 555 | site-specific recombinase | |||
| ??? | R | Mfe10117ORF551P (100% identity) | Mfe10117ORF88P | |
| 551 | M | M.MfeJERORF8340P (100% identity) | M.Mfe10117ORF88P | |
| ??? | S | S3.Mfe18ORF720P (100% identity) | S1.Mfe10117ORF88P | |
| 553 | S | S2.Mfe10117ORF551P (100% identity) | S2.Mfe10117ORF88P | |
| 554 | Uncharacterised protein | |||
| plasmid 5 | ||||
| 573 | repb | |||
| 574 | S | S5.Mfe64ORF570P (100% identity) | S1.Mfe10117ORF574P | |
| 575 | S | S3.Mfe10117ORF593P (100% identity) | S2.Mfe10117ORF574P | |
| 576 | site-specific tyrosine recombinase XerC | |||
| 577 | type i restriction-modification system, s | |||
| 578 | Uncharacterised protein | |||
| 579 | S | Uncharacterised protein | S3.Mfe10117ORF574P | |
| 580 | Uncharacterised protein | |||
| plasmid 6 | ||||
| 592 | repb | |||
| 593 | S | S2.Mfe64ORF570P (73% identity) | S1.Mfe10117ORF593P | |
| 594 | Tyrosine recombinase XerC | |||
| 595 | Uncharacterised protein | |||
| 596 | S | S3.Mfe10117ORF2127P (100% identity) | S2.Mfe10117ORF593P | |
| 597 | S | S2.Mfe10117ORF574P (100% identity) | S3.Mfe10117ORF593P | |
| 598 | S | EcoKI restriction-modification system protein | S4.Mfe10117ORF593P | |
| 599 | Uncharacterised protein | |||
| plasmid 7 | ||||
| ??? | R | MfeJERORF8340P (93% identity) | Mfe10117ORF607P | |
| ??? | M | M.MfeJERORF8340P (98% identity) | M.Mfe10117ORF607P | |
| ??? | S | restriction endonuclease subunit S | S1.Mfe10117ORF607P | |
| 611 | S | S2.MfeJERORF8340P (39% identity) | S2.Mfe10117ORF607P | |
| ??? | S | S3.MfeJERORF8340P (59% identity) | S3.Mfe10117ORF607P | |
| 612 | type I restriction-modification system subunit | |||
| ??? | restriction endonuclease subunit S | |||
| 612 | S | S2.MfeJERORF8340P (80% identity) | S2.Mfe10117ORF614P | |
| ??? | S | restriction endonuclease subunit S | S1.Mfe10117ORF614P | |
| ??? | M | M.MfeJERORF8340P (92% identity) | M.Mfe10117ORF614P | |
| ??? | R | MfeJERORF8340P (61% identity) | Mfe10117ORF614P | |
| plasmid 9 | ||||
| 1929 | cell filamentation protein Fic | |||
| 1930 | R | Type-1 restriction enzyme R protein | Mfe10117ORF1931P | |
| 1931 | M | M.Mfe64ORF597P (100% identity) | M.Mfe10117ORF1931P | |
| 1932 | S | S.Mfe18ORF23P (100% identity) | S.Mfe10117ORF1931P | |
| 1933 | ExiS | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 144 | Xylulose-5-phosphate phosphoketolase | |||
| 145 | M | M.Mfe64ORF19P (100% identity) | M.Mfe10117ORF145P | |
| 148 | Uncharacterised protein | |||
| 227 | Holliday junction DNA helicase RuvB | |||
| 228 | M | M.Mfe64ORF106P (100% identity) | M.Mfe10117ORF228P | |
| 229 | Uncharacterised protein | |||
| 269 | Nucleotidyl transferase of uncharacterised | |||
| 270 | R | Mco10147ORF1823P (100% identity) | Mfe10117ORF271P | |
| ??? | M | M.Mfe64ORF147P (100% identity) | M.Mfe10117ORF271P | |
| 272 | Divergent AAA domain | |||
| 357 | Holliday junction DNA helicase RuvB | |||
| 358 | M | M.Mfe64ORF106P (100% identity) | M.Mfe10117ORF358P | |
| 359 | Uncharacterised protein | |||
| chromosome 8 | ||||
| 1459 | Uncharacterised protein | |||
| 1460 | M | M.MioM821ORF845P (100% identity) | CTAG | M.Mfe10117I |
| 1461 | R | MioM821ORF845P (100% identity) | CTAG | Mfe10117IP |
| 1462 | transposase | |||
| plasmid 9 | ||||
| 1704 | Protein of uncharacterised function DUF262 | |||
| 1705 | M | M.Mfe18ORF615P (100% identity) | M.Mfe10117ORF1705P | |
| 1706 | pyruvate dehydrogenase E2 component | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 8 | ||||
| 1403 | Uncharacterised protein | |||
| 1404 | M | M.MioM817ORF260P (100% identity) | M.Mfe10117ORF1404P | |
| 1405 | R | MioM817ORF260P (100% identity) | Mfe10117ORF1404P | |
| 1406 | Hef nuclease | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 8 | ||||
| 874 | Uncharacterised protein | |||
| 875 | M | M.MioM822ORF20P (100% identity) | M.Mfe10117ORF875P | |
| 876 | tRNA s(4)U8 sulfurtransferase | |||