Escherichia coli BR12-DEC |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli BR12-DEC RM systems
Ref: da Silva,P. et al. unpublished
REBASE ref # 28181
Complete sequence: 4,824,995 bp
GenBank #: CP035325
REBASE acronym: Eco12DEC
Org_num: 33399
All begin ETE51_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 14290 | IS3 family transposase | |||
| 14295 | M | M.SenS688ORF13495P (100% identity) | ACAYNNNNCTG | M.Eco12DECORF14295P |
| 14300 | S | S.Sen12509ORF5865P (100% identity) | ACAYNNNNCTG | S.Eco12DECORF14295P |
| 14305 | R | Sen12509ORF5865P (100% identity) | ACAYNNNNCTG | Eco12DECORF14295P |
| 14310 | IS1 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10410 | drug/metabolite exporter YedA | |||
| 10415 | V | V.SflFF64DcmP (100% identity) | V.Eco12DECDcmP | |
| 10420 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.Eco12DECDcmP |
| 10425 | phosphohydrolase | |||
| 17460 | DNA-binding transcriptional regulator Fis | |||
| 17465 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.Eco12DECORF17465P |
| 17470 | DUF2556 domain-containing protein | |||
| 18215 | ribulose-phosphate 3-epimerase | |||
| 18220 | M | adenine-specific DNA-methyltransferase | GATC | M.Eco12DECDamP |
| 18225 | cell division protein DamX | |||
| 21965 | PerC family transcriptional regulator | |||
| 21970 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco12DECORF21970P |
| 21975 | LexA family transcriptional regulator | |||
| 23730 | 0 aa hypothetical protein | |||
| 23735 | M | M.KpnVA569ORF28145P (100% identity) | M.Eco12DECORF23735P | |
| 23740 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6345 | recombinase family protein | |||
| 6350 | R | EcoteDMcrBP (100% identity) | Eco12DECMcrBP | |
| 6355 | R | EcosEC27McrCP (100% identity) | Eco12DECMcrCP | |
| 6360 | isocitrate dehydrogenase | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4765 | TraR/DksA family transcriptional regulator | |||
| 4770 | M | M.Sen663ORF16605P (100% identity) | GATC | M.Eco12DECORF4770P |
| 4775 | replication endonuclease | |||