Escherichia coli BR25-DEC |
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Putative Escherichia coli BR25-DEC RM systems
Ref: da Silva,P. et al. unpublished
REBASE ref # 28181
| Sequence length: | GenBank #: | |
| Chromosome: | 4,818,513 bp | CP035331 |
| plasmid unnamed2: | 96,170 bp | CP035333 |
REBASE acronym: Eco25DEC
Org_num: 33400
All begin ETE53_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 8295 | restriction endonuclease subunit S | |||
| 8300 | M | M.Ror24150ORF17255P (99% identity) | M.Eco25DECORF8300P | |
| 8305 | chromosome partitioning protein ParB | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 680 | osmoprotectant transport activator ProQ | |||
| 685 | M | M.SflFF24DndBP (100% identity) | M.Eco25DECDndBP | |
| 690 | DNA phosphorothioation system sulfurtransferase | |||
| 685 | DNA sulfur modification protein DndB | |||
| 690 | M | M.SflFF24DndCP (100% identity) | M.Eco25DECDndCP | |
| 695 | DNA sulfur modification protein DndD | |||
| 690 | DNA phosphorothioation system sulfurtransferase | |||
| 695 | M | M.SflFF24DndDP (100% identity) | M.Eco25DECDndDP | |
| 700 | DNA sulfur modification protein DndE | |||
| 695 | DNA sulfur modification protein DndD | |||
| 700 | M | M.SflFF24DndEP (100% identity) | M.Eco25DECDndEP | |
| 705 | DGQHR domain-containing protein | |||
| 715 | 172 aa hypothetical protein | |||
| 720 | R | EcosEC5DptHP (100% identity) | Eco25DECDptHP | |
| 725 | DNA phosphorothioation-dependent restriction | |||
| 720 | DNA phosphorothioation-dependent restriction | |||
| 725 | R | SflFF24DptGP (100% identity) | Eco25DECDptGP | |
| 730 | DNA phosphorothioation-dependent restriction | |||
| 725 | DNA phosphorothioation-dependent restriction | |||
| 730 | R | SflFF24DptFP (100% identity) | Eco25DECDptFP | |
| 735 | integrase | |||
| 5000 | DUF2556 domain-containing protein | |||
| 5005 | M | M.Ecoww7ORF17400P (100% identity) | ATGCAT | M.Eco25DECORF5005P |
| 5010 | DNA-binding transcriptional regulator Fis | |||
| 6020 | TraR/DksA family transcriptional regulator | |||
| 6025 | M | M.EcoPSS07ORFAP (70% identity) | M.Eco25DECORF6025P | |
| 6030 | tolA | |||
| 8905 | 116 aa hypothetical protein | |||
| 8910 | M | M.EcoS104ORF16470P (100% identity) | M.Eco25DECORF8910P | |
| 8915 | DUF1317 family protein | |||
| 11670 | phosphohydrolase | |||
| 11675 | M | M.SdyFF10DcmP (100% identity) | CCWGG | M.Eco25DECDcmP |
| 11680 | V | V.SsoSE61DcmP (100% identity) | V.Eco25DECDcmP | |
| 11685 | drug/metabolite exporter YedA | |||
| 14725 | cell division protein DamX | |||
| 14730 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco25DECDamP |
| 14735 | ribulose-phosphate 3-epimerase | |||
| 21255 | phage lysis protein EssD | |||
| 21260 | M | M.Sso63633ORF22290P (100% identity) | M.Eco25DECORF21260P | |
| 21265 | TrmB family transcriptional regulator | |||
| 23195 | 0 aa hypothetical protein | |||
| 23200 | M | M.SenS380ORF24445P (100% identity) | M.Eco25DECORF23200P | |
| 23205 | 73 aa hypothetical protein | |||
| plasmid unnamed2 | ||||
| 24155 | recombination-associated protein RdgC | |||
| 24160 | M | M.Eco33CCORF50530P (100% identity) | M.Eco25DECORF24160P | |
| 24175 | 63 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid unnamed2 | ||||
| 24435 | maturation control protein | |||
| 24440 | R | Sen68045ORF16165P (100% identity) | AGACC | Eco25DECORF24445P |
| ??? | M | M.Sen68045ORF16165P (100% identity) | AGACC | M.Eco25DECORF24445P |
| 24450 | modulator protein | |||