Citrobacter freundii R17 |
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Putative Citrobacter freundii R17 RM systems
Ref: Jiang,X. and Zheng,B. unpublished
REBASE ref # 28169
| Sequence length: | GenBank #: | |
| Chromosome: | 5,124,258 bp | CP035276 |
| plasmid pCFR17_1: | 206,820 bp | CP035277 |
REBASE acronym: CfrR17
Org_num: 33351
All begin EQ249_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3520 | inovirus Gp2 family protein | |||
| 3525 | M | M.Sen80013ORF6310P (100% identity) | M.CfrR17ORF3525P | |
| 3530 | anticodon nuclease | |||
| 3535 | S | S.Sen80013ORF6310P (100% identity) | S.CfrR17ORF3525P | |
| 3540 | 61 aa hypothetical protein | |||
| 3545 | R | Sen80013ORF6310P (100% identity) | CfrR17ORF3525P | |
| 3550 | 56 aa hypothetical protein | |||
| 21665 | restriction endonuclease | |||
| 21670 | M | M.CyoCF10ORF20830P (98% identity) | M.CfrR17ORF21670P | |
| 21675 | S | S.CweMH18II (59% identity) | S.CfrR17ORF21670P | |
| 21680 | R | Sen5056ORF19475P (98% identity) | CfrR17ORF21670P | |
| 21685 | endoribonuclease SymE | |||
| 21930 | toll/interleukin-1 receptor domain-containing | |||
| 21935 | R | Kox1686ORF9540P (99% identity) | CfrR17ORF21940P | |
| 21940 | M | M.Ero982ORF2475P (98% identity) | M.CfrR17ORF21940P | |
| 21945 | S | S.Psp119ORFCP (54% identity) | S.CfrR17ORF21940P | |
| 21950 | 384 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1835 | cell division protein DamX | |||
| 1840 | M | M.Eco5172DamP (100% identity) | GATC | M.CfrR17DamP |
| 1845 | ribulose-phosphate 3-epimerase | |||
| 2385 | DUF2556 domain-containing protein | |||
| 2390 | M | M.CspLUTT5ORF2195P (100% identity) | ATGCAT | M.CfrR17ORF2390P |
| 2395 | DNA-binding transcriptional regulator Fis | |||
| 7810 | 72 aa hypothetical protein | |||
| 7815 | M | M.Cfr12C20ORF14630P (96% identity) | M.CfrR17ORF7815P | |
| 7820 | 94 aa hypothetical protein | |||
| 8910 | 326 aa hypothetical protein | |||
| 8915 | M | M2.Cfr7749CORF20P (98% identity) | M.CfrR17ORF8915P | |
| 8920 | RusA family crossover junction | |||
| 10430 | phosphohydrolase | |||
| 10435 | M | M.CfrZY198ORF9290P (100% identity) | CCWGG | M.CfrR17ORF10435P |
| 10440 | V | V.CspS39ORF13780P (100% identity) | V.CfrR17ORF10435P | |
| 10445 | drug/metabolite exporter YedA | |||
| 11885 | integrase | |||
| 11890 | R | CspMGH103ORFIP (82% identity) | CfrR17ORF11895P | |
| 11895 | M | M.EroWS222ORF18775P (98% identity) | M.CfrR17ORF11895P | |
| 11900 | 472 aa hypothetical protein | |||
| plasmid pCFR17_1 | ||||
| 26230 | 73 aa hypothetical protein | |||
| 26235 | M | M.Kpni11ayORF5166P (100% identity) | M.CfrR17ORF26235P | |
| 26240 | DNA breaking-rejoining protein | |||
| 26260 | integrase | |||
| 26265 | R | SmaBWH35ORF16650P (100% identity) | CCWGG | CfrR17ORF26270P |
| 26270 | M | M.SmaBWH35ORF16650P (100% identity) | CCWGG | M.CfrR17ORF26270P |
| 26275 | AAA family ATPase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 16065 | site-specific integrase | |||
| 16070 | M | M.Rpl430II (99% identity) | M.CfrR17ORF16070P | |
| 16075 | R | Eas576ORF16290P (99% identity) | CfrR17ORF16070P | |
| 16080 | shufflon system plasmid conjugative transfer | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21655 | 130 aa hypothetical protein | |||
| 21660 | R | CyoCF10McrBP (100% identity) | CfrR17McrBP | |
| 21665 | R | CyoCF10McrCP (99% identity) | CfrR17McrCP | |
| 21670 | DNA methyltransferase | |||