Escherichia coli SCEC020026 |
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Putative Escherichia coli SCEC020026 RM systems
Ref: Liu,L. et al. unpublished
REBASE ref # 26344
| Sequence length: | GenBank #: | |
| Chromosome: | 4,763,166 bp | CP034958 |
| plasmid pCTXM15_020026: | 98,397 bp | CP034956 |
REBASE acronym: Eco20026
Org_num: 33316
All begin C7V14_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6815 | IS1 family transposase | |||
| 6820 | R | Sen12509ORF5865P (100% identity) | ACAYNNNNCTG | Eco20026ORF6830P |
| 6825 | S | S.Sen12509ORF5865P (100% identity) | ACAYNNNNCTG | S.Eco20026ORF6830P |
| 6830 | M | M.SenS688ORF13495P (100% identity) | ACAYNNNNCTG | M.Eco20026ORF6830P |
| 6835 | IS3 family transposase | |||
| 14765 | transcription factor | |||
| 14770 | M | M.EcosE2ORF13465P (100% identity) | YTCANNNNNNGTTY | M.Eco20026ORF14770P |
| 14775 | S | S.EcosE2ORF13465P (100% identity) | YTCANNNNNNGTTY | S.Eco20026ORF14770P |
| 14780 | DUF4433 domain-containing protein | |||
| 14785 | Appr-1-p processing protein | |||
| 14790 | R | Sbo49812IP (100% identity) | YTCANNNNNNGTTY | Eco20026ORF14770P |
| 14795 | M48 family peptidase | |||
| plasmid pCTXM15_020026 | ||||
| 645 | IS1 family transposase | |||
| 650 | R | EcosR11ORF25685P (100% identity) | CAAYNNNNNNCTGG | Eco20026ORF660P |
| 655 | S | S.SenceORFJP (100% identity) | CAAYNNNNNNCTGG | S.Eco20026ORF660P |
| 660 | M | M.KpnKPA1ORF26345P (100% identity) | CAAYNNNNNNCTGG | M.Eco20026ORF660P |
| 665 | type II toxin-antitoxin system Phd/YefM family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2980 | cell division protein DamX | |||
| 2985 | M | adenine-specific DNA-methyltransferase | GATC | M.Eco20026DamP |
| 2990 | ribulose-phosphate 3-epimerase | |||
| 3610 | DUF2556 domain-containing protein | |||
| 3615 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.Eco20026ORF3615P |
| 3620 | DNA-binding transcriptional regulator Fis | |||
| 10065 | phosphohydrolase | |||
| 10070 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.Eco20026DcmP |
| 10075 | V | V.SsoSE61DcmP (100% identity) | V.Eco20026DcmP | |
| 10080 | drug/metabolite exporter YedA | |||
| 23020 | 345 aa hypothetical protein | |||
| 23025 | M | M.EcosE2ORF21575P (100% identity) | M.Eco20026ORF23025P | |
| 23030 | 68 aa hypothetical protein | |||
| plasmid pCTXM15_020026 | ||||
| 535 | 73 aa hypothetical protein | |||
| 540 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.Eco20026ORF540P |
| 545 | 0 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14060 | isocitrate dehydrogenase | |||
| 14065 | R | EcosEC27McrCP (100% identity) | Eco20026McrCP | |
| 14070 | R | EcoteDMcrBP (100% identity) | Eco20026McrBP | |
| 14075 | recombinase family protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 16000 | replication endonuclease | |||
| 16005 | M | M.Sen663ORF16605P (100% identity) | GATC | M.Eco20026ORF16005P |
| 16010 | TraR/DksA family transcriptional regulator | |||