Clostridium septicum VAT12 |
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Putative Clostridium septicum VAT12 RM systems
Ref: Mahsoub,H.M. et al. unpublished
REBASE ref # 28164
Complete sequence: 3,454,144 bp
GenBank #: CP034358
REBASE acronym: CseVAT12
Org_num: 33330
All begin EI377_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 15125 | 88 aa hypothetical protein | |||
| 15130 | R | Csp7534IP (92% identity) | AAGNNNNNRTGAA | CseVAT12ORF15145P |
| 15135 | cell filamentation protein Fic | |||
| 15140 | S | S.Csp7534I (100% identity) | AAGNNNNNRTGAA | S.CseVAT12ORF15145P |
| 15145 | M | M.Csp7534I (100% identity) | AAGNNNNNRTGAA | M.CseVAT12ORF15145P |
| 15150 | YdcF family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1955 | pentapeptide repeat-containing protein | |||
| 1960 | M | M.Csp7534III (100% identity) | GTATAC | M.CseVAT12ORF1960P |
| 1965 | DNA polymerase III subunit epsilon | |||
| 8240 | helix-turn-helix domain-containing protein | |||
| 8245 | M | M.Csp7534ORF13355P (100% identity) | M.CseVAT12ORF8245P | |
| 8250 | DUF488 domain-containing protein | |||
| 9300 | S-adenosylmethionine synthetase | |||
| 9305 | M | M.Efa2330ORF31270P (88% identity) | M1.CseVAT12ORF9305P | |
| 9310 | M | M1.Ppo4ORF13500P (45% identity) | M2.CseVAT12ORF9305P | |
| 9315 | threonine--tRNA ligase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 14135 | (deoxy)nucleoside triphosphate | |||
| 14140 | R | Csp7534ORF3610P (100% identity) | CseVAT12ORF14140P | |
| 14145 | 0 aa hypothetical protein | |||