Escherichia coli EC25 |
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Putative Escherichia coli EC25 RM systems
Ref: He,F. unpublished
REBASE ref # 28143
| Sequence length: | GenBank #: | |
| Chromosome: | 4,782,653 bp | CP035123 |
| plasmid pEC25-1: | 227,349 bp | CP035124 |
REBASE acronym: EcoC25
Org_num: 33281
All begin EQK40_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5755 | IS1 family transposase | |||
| 5760 | R | Sen12509ORF5865P (100% identity) | ACAYNNNNCTG | EcoC25ORF5770P |
| 5765 | S | S.Sen12509ORF5865P (100% identity) | ACAYNNNNCTG | S.EcoC25ORF5770P |
| 5770 | M | M.SenS688ORF13495P (100% identity) | ACAYNNNNCTG | M.EcoC25ORF5770P |
| 5775 | IS3 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2005 | cell division protein DamX | |||
| 2010 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoC25DamP |
| 2015 | ribulose-phosphate 3-epimerase | |||
| 2635 | DUF2556 domain-containing protein | |||
| 2640 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.EcoC25ORF2640P |
| 2645 | DNA-binding transcriptional regulator Fis | |||
| 9530 | phosphohydrolase | |||
| 9535 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.EcoC25DcmP |
| 9540 | V | V.SflFF64DcmP (100% identity) | V.EcoC25DcmP | |
| 9545 | drug/metabolite exporter YedA | |||
| plasmid pEC25-1 | ||||
| 23785 | 73 aa hypothetical protein | |||
| 23790 | M | M.SmaQC11ORF52800P (100% identity) | M.EcoC25ORF23790P | |
| 23795 | 76 aa hypothetical protein | |||
| 24495 | 73 aa hypothetical protein | |||
| 24500 | M | M.KpnVA569ORF28145P (100% identity) | M.EcoC25ORF24500P | |
| 24505 | 0 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 13570 | isocitrate dehydrogenase | |||
| 13575 | R | EcosEC27McrCP (100% identity) | EcoC25McrCP | |
| 13580 | R | EcoteDMcrBP (100% identity) | EcoC25McrBP | |
| 13585 | recombinase family protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 15140 | replication endonuclease | |||
| 15145 | M | M.Sen663ORF16605P (100% identity) | GATC | M.EcoC25ORF15145P |
| 15150 | TraR/DksA family transcriptional regulator | |||