Putative Lactobacillus plantarum YW11 RM systems
Ref: Zhang,J. et al. J. Dairy Sci. 100 (8), 6025-6041 (2017)
REBASE ref # 28139
Sequence length: | GenBank #: | |
Chromosome: | 2,991,907 bp | CP035031 |
plasmid plsm_YW11_pD: | 45,216 bp | CP035029 |
REBASE acronym: LplYW11
Org_num: 33275
All begin EPT60_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
11835 | histidine phosphatase family protein | |||
11840 | S | S3.Lpl391ORF11370P (100% identity) | S3.LplYW11ORF11860P | |
11845 | S | S2.LplP8ORF734P (100% identity) | S2.LplYW11ORF11860P | |
11850 | site-specific integrase | |||
11855 | S | S1.LplZW59ORF3580P (100% identity) | S1.LplYW11ORF11860P | |
11860 | M | M.LplZW59ORF3580P (100% identity) | M.LplYW11ORF11860P | |
11865 | R | LplV38ORF3570P (83% identity) | LplYW11ORF11860P | |
11870 | ABC transporter ATP-binding protein | |||
plasmid plsm_YW11_pD | ||||
695 | 336 aa hypothetical protein | |||
700 | R | LplP8ORF21P (100% identity) | LplYW11ORF705P | |
705 | M | M.LplP8ORF21P (100% identity) | M.LplYW11ORF705P | |
710 | S | S.LplP8ORF21P (97% identity) | S.LplYW11ORF705P | |
715 | 29 aa hypothetical protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
8330 | NADP oxidoreductase | |||
8335 | R | Lpr5300MrrP (100% identity) | LplYW11MrrP | |
8340 | LysR family transcriptional regulator |