Akkermansia muciniphila AMDK-16 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Akkermansia muciniphila AMDK-16 RM systems
Ref: Nam,Y.-D. et al. unpublished
REBASE ref # 24816
Complete sequence: 2,770,073 bp
GenBank #: CP025831
REBASE acronym: Amu16
Org_num: 33147
All begin C1O51_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 505 | metal-dependent hydrolase | |||
| 510 | R | Amu18ORF515P (100% identity) | Amu16ORF520P | |
| 515 | S | S.AmuH2ORF6940P (100% identity) | S.Amu16ORF520P | |
| 520 | M | M.AmuH2ORF6940P (100% identity) | M.Amu16ORF520P | |
| 525 | restriction endonuclease | |||
| 4950 | 223 aa hypothetical protein | |||
| 4955 | M | M.AmuH2ORF11480P (100% identity) | M.Amu16ORF4955P | |
| 4960 | S | S.Amu18ORF4920P (100% identity) | S.Amu16ORF4955P | |
| 4965 | anticodon nuclease | |||
| 4970 | R | AmuH2ORF11480P (100% identity) | Amu16ORF4955P | |
| 4975 | 489 aa hypothetical protein | |||
| 10895 | 167 aa hypothetical protein | |||
| 10900 | M | M.AmuH2ORF5185P (100% identity) | M.Amu16ORF10900P | |
| 10905 | S | S3.AmuAMDK1ORF7975P (100% identity) | S1.Amu16ORF10900P | |
| 10910 | S | S2.Amu500bORF10675P (100% identity) | S2.Amu16ORF10900P | |
| 10915 | cell filamentation protein Fic | |||
| 10920 | integrase | |||
| 10925 | S | S3.AmuH2ORF5185P (100% identity) | S3.Amu16ORF10900P | |
| 10930 | R | AmuH2ORF5185P (100% identity) | Amu16ORF10900P | |
| 10940 | homoserine dehydrogenase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5785 | Holliday junction branch migration DNA helicase | |||
| 5795 | R | AmuH2ORF140P (100% identity) | Amu16ORF5800P | |
| 5800 | M | M.AmuH2ORF140P (100% identity) | M.Amu16ORF5800P | |
| 5805 | V | V.AmuH2ORF140P (100% identity) | V.Amu16ORF5800P | |
| 5810 | 77 aa hypothetical protein | |||
| 5955 | 121 aa hypothetical protein | |||
| 5960 | M | M.AmuH2ORF300P (100% identity) | M.Amu16ORF5960P | |
| 5965 | 443 aa hypothetical protein | |||
| 8090 | 85 aa hypothetical protein | |||
| 8095 | M | M.AspMGS1ORFKP (100% identity) | M.Amu16ORF8095P | |
| 8100 | 129 aa hypothetical protein | |||
| 8870 | EamA/RhaT family transporter | |||
| 8875 | R | AmuH2ORF3180P (100% identity) | Amu16ORF8875P | |
| 10600 | 184 aa hypothetical protein | |||
| 10605 | M | M.AspMGS1ORFHP (87% identity) | M.Amu16ORF10605P | |
| 10610 | tyrosine recombinase | |||
| 11295 | 349 aa hypothetical protein | |||
| 11300 | M | M1.AmuH2ORF5585P (100% identity) | M1.Amu16ORF11300P | |
| 11305 | M | M2.AspK43ORF11185P (100% identity) | M2.Amu16ORF11300P | |
| 11310 | RM | Amu18ORF11375P (100% identity) | Amu16ORF11300P | |
| 11315 | MATE family efflux transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 520 | type I restriction endonuclease subunit M | |||
| 525 | R | Amu18MrrP (100% identity) | Amu16MrrP | |
| 530 | DUF932 domain-containing protein | |||
| 9905 | ApaG domain | |||
| 9910 | R | AmuNB28McrBP (100% identity) | Amu16McrBP | |
| 9915 | R | AmuNB28McrCP (100% identity) | Amu16McrCP | |
| 9920 | RNA polymerase-associated protein RapA | |||