Clostridium species CT4 |
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Putative Clostridium species CT4 RM systems
Ref: Tachaapaikoon,C. et al. unpublished
REBASE ref # 28087
Complete sequence: 6,364,326 bp
GenBank #: CP025746
REBASE acronym: CspCT4
Org_num: 33155
All begin C1I91_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 6460 | 141 aa hypothetical protein | |||
| 6465 | M | M.Ctecb2ORF9040P (91% identity) | M.CspCT4ORF6465P | |
| 6470 | S | S1.Ces5ORF24430P (78% identity) | S1.CspCT4ORF6465P | |
| 6475 | S | S.BmaG2ORFCP (41% identity) | S2.CspCT4ORF6465P | |
| 6480 | 169 aa hypothetical protein | |||
| 6485 | 165 aa hypothetical protein | |||
| 6490 | R | Cpa373ORF2770P (79% identity) | CspCT4ORF6465P | |
| 6495 | 73 aa hypothetical protein | |||
| 14535 | DNA-binding protein | |||
| 14540 | M | M.GstP3ORF7175P (53% identity) | M.CspCT4ORF14540P | |
| 14545 | S | S.CspJS66ORF4915P (39% identity) | S.CspCT4ORF14540P | |
| 14550 | AAA family ATPase | |||
| 14555 | 171 aa hypothetical protein | |||
| 14560 | 202 aa hypothetical protein | |||
| 14565 | 304 aa hypothetical protein | |||
| 14570 | 267 aa hypothetical protein | |||
| 14575 | 386 aa hypothetical protein | |||
| 14580 | R | PspE1317IP (38% identity) | CspCT4ORF14540P | |
| 14585 | transporter | |||
| 18905 | 218 aa hypothetical protein | |||
| 18910 | S | S2.Bhu2003ORF1190P (34% identity) | S2.CspCT4ORF18925P | |
| 18915 | integrase | |||
| 18920 | S | S.Cse106ORF13155P (49% identity) | S1.CspCT4ORF18925P | |
| 18925 | M | M.Cco2909I (86% identity) | M.CspCT4ORF18925P | |
| 18930 | R | Fme5667ORF1735P (88% identity) | CspCT4ORF18925P | |
| 18935 | 190 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 13950 | XRE family transcriptional regulator | |||
| 13955 | M | M.BceSIV (92% identity) | M.CspCT4ORF13955P | |
| 13960 | R | R2.CklJZZORF15075P (90% identity) | CspCT4ORF13955P | |
| 13965 | H | H.CklJZZORF15075P (44% identity) | H1.CspCT4ORF13955P | |
| 13970 | IS3 family transposase | |||
| 13975 | H | H.LspG01HORF20595P (48% identity) | H2.CspCT4ORF13955P | |
| 13980 | type II restriction endonuclease | |||
| 13975 | restriction endonuclease | |||
| 13980 | R | BgiM211ORF13085P (93% identity) | CspCT4ORF13980P | |
| 13985 | Cro/Cl family transcriptional regulator | |||
| 14080 | methionine adenosyltransferase | |||
| 14085 | M | M2.Cho5847ORF16520P (100% identity) | M.CspCT4ORF14085P | |
| 14090 | DNA cytosine methyltransferase | |||
| 14085 | DNA modification methylase | |||
| 14090 | M | M1.Cho5847ORF16520P (100% identity) | M.CspCT4ORF14090P | |
| 14095 | virulence protein | |||
| 14495 | 570 aa hypothetical protein | |||
| 14500 | M | M.Ckl002ORF12845P (96% identity) | M.CspCT4ORF14500P | |
| 14505 | 124 aa hypothetical protein | |||
| 26515 | DNA/RNA helicase, superfamily II, SNF2 family | |||
| 26520 | M | M.CspMORF2951P (99% identity) | M.CspCT4ORF26520P | |
| 26525 | DNA-binding protein | |||
| 26565 | 224 aa hypothetical protein | |||
| 26570 | M | M.CspMORF2942P (99% identity) | M.CspCT4ORF26570P | |
| 26575 | 125 aa hypothetical protein | |||
| 26575 | 125 aa hypothetical protein | |||
| 26580 | M | M.Ckl002ORF12845P (80% identity) | M.CspCT4ORF26580P | |
| 26585 | 575 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 895 | 308 aa hypothetical protein | |||
| 900 | R | Lwa3934ORF52P (55% identity) | CspCT4ORF905P | |
| 905 | M | M.SwoGORF1463P (55% identity) | M.CspCT4ORF905P | |
| 910 | DNA repair protein RadC | |||
| 26500 | helicase | |||
| 26505 | R | CspMORF2953P (98% identity) | CspCT4ORF26510P | |
| 26510 | M | M.PmeBin308ORFBP (66% identity) | M.CspCT4ORF26510P | |
| 26515 | DNA/RNA helicase, superfamily II, SNF2 family | |||