Escherichia coli L103-2 |
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Putative Escherichia coli L103-2 RM systems
Ref: Liu,Z. et al. unpublished
REBASE ref # 28131
| Sequence length: | GenBank #: | |
| Chromosome: | 4,773,616 bp | CP034843 |
| plasmid p103-2-2: | 110,310 bp | CP034844 |
| plasmid p103-2-3: | 102,395 bp | CP034845 |
| plasmid p103-2-4: | 100,767 bp | CP034846 |
REBASE acronym: EcoL1032
Org_num: 33265
All begin EO769_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10140 | 410 aa hypothetical protein | |||
| 10145 | M | M.EcoS1632ORFHP (100% identity) | M.EcoL1032ORF10145P | |
| 10150 | S | S.EcoP61ORF9315P (100% identity) | S.EcoL1032ORF10145P | |
| 10155 | R | EcoS1632ORFHP (100% identity) | EcoL1032ORF10145P | |
| 10160 | M48 family peptidase | |||
| plasmid p103-2-3 | ||||
| 24930 | type II toxin-antitoxin system Phd/YefM family | |||
| 24935 | M | M.Efe9LTORF43980P (99% identity) | M.EcoL1032ORF24935P | |
| 24940 | S | S.KvaX39ORF28705P (20% identity) | S1.EcoL1032ORF24935P | |
| 24945 | IS5-like element ISKpn26 family transposase | |||
| 24950 | S | S.Efe9LTORF43980P (78% identity) | S2.EcoL1032ORF24935P | |
| 24955 | R | EcoL411ORF22740P (99% identity) | EcoL1032ORF24935P | |
| 24960 | 3-phosphatase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1735 | cell division protein DamX | |||
| 1740 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoL1032DamP |
| 1745 | ribulose-phosphate 3-epimerase | |||
| 2375 | DUF2556 domain-containing protein | |||
| 2380 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.EcoL1032ORF2380P |
| 2385 | DNA-binding transcriptional regulator Fis | |||
| 9210 | recombination protein NinB | |||
| 9215 | M | M.EcoPI24ORF7130P (100% identity) | GATC | M.EcoL1032ORF9215P |
| 9220 | NinE family protein | |||
| 9785 | phosphohydrolase | |||
| 9790 | M | M.SspS13DcmP (100% identity) | CCWGG | M.EcoL1032DcmP |
| 9795 | V | V.SsoSE61DcmP (100% identity) | V.EcoL1032DcmP | |
| 9800 | drug/metabolite exporter YedA | |||
| 13925 | 154 aa hypothetical protein | |||
| 13930 | M | M.Eho50319ORF19985P (98% identity) | M.EcoL1032ORF13930P | |
| 13935 | 72 aa hypothetical protein | |||
| 16125 | replication endonuclease | |||
| 16130 | M | M.EcoVA1ORFFP (100% identity) | GATC | M.EcoL1032ORF16130P |
| 16135 | TraR/DksA family transcriptional regulator | |||
| plasmid p103-2-4 | ||||
| 25335 | 59 aa hypothetical protein | |||
| 25340 | M | M.Xca80ORFEP (100% identity) | M.EcoL1032ORF25340P | |
| 25345 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid p103-2-4 | ||||
| 25205 | mobilization protein MobX | |||
| 25210 | R | SspS13ORF650P (100% identity) | EcoL1032ORF25215P | |
| 25215 | M | M.SspS13ORF650P (100% identity) | M.EcoL1032ORF25215P | |
| 25220 | 67 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid p103-2-2 | ||||
| 24485 | 76 aa hypothetical protein | |||
| 24490 | M | M.Sso524ORF460P (100% identity) | M.EcoL1032ORF24490P | |
| 24495 | 269 aa hypothetical protein | |||