Pseudoalteromonas species R3 |
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Putative Pseudoalteromonas species R3 RM systems
Ref: Yu,D. unpublished
REBASE ref # 20946
| Sequence length: | GenBank #: | |
| chromosome 1: | 4,496,250 bp | CP034835 |
| chromosome 2: | 1,328,532 bp | CP034834 |
REBASE acronym: PspR3
Org_num: 17603
All begin ELR70_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 17835 | 0 aa hypothetical protein | |||
| 17840 | S | S.PspR3ORFAP (100% identity) | S.PspR3ORF17845P | |
| ??? | M | M.PspR3ORFAP (100% identity) | M.PspR3ORF17845P | |
| 17855 | R | PspR3ORFAP (100% identity) | PspR3ORF17845P | |
| 17860 | IS5 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 17795 | recombination-associated protein RdgC | |||
| 17800 | M | M.PspR3ORFBP (100% identity) | M.PspR3ORF17800P | |
| 17805 | excisionase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 2 | ||||
| 975 | 297 aa hypothetical protein | |||
| 980 | R | PspR3ORFDP (100% identity) | PspR3ORF980P | |
| 985 | 104 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 5920 | cell division protein DamX | |||
| 5925 | M | M.PspR3ORFCP (84% identity) | M.PspR3ORF5925P | |
| 5930 | DUF2970 domain-containing protein | |||