Escherichia coli ECCNB20-2 |
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Putative Escherichia coli ECCNB20-2 RM systems
Ref: Tang,B. et al. unpublished
REBASE ref # 28104
| Sequence length: | GenBank #: | |
| Chromosome: | 4,795,280 bp | CP034787 |
| plasmid pTB422: | 159,108 bp | CP034789 |
| plasmid pTB423: | 91,762 bp | CP034790 |
| plasmid pTBMCR421: | 254,365 bp | CP034788 |
REBASE acronym: EcoB202
Org_num: 33182
All begin CRG85_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14700 | GTPase family protein | |||
| 14705 | M | M.Sen1467ORF14775P (100% identity) | CACNNNNNNTCC | M.EcoB202ORF14705P |
| 14710 | S | S.Sen1467ORF14775P (100% identity) | CACNNNNNNTCC | S.EcoB202ORF14705P |
| 14715 | R | Sen1467ORF14775P (100% identity) | CACNNNNNNTCC | EcoB202ORF14705P |
| 14720 | IS5-like element ISKpn26 family transposase | |||
| 19740 | restriction endonuclease | |||
| ??? | R | EcoPSJ29ORF36940P (100% identity) | CCANNNNNNNRTAYG | EcoB202ORF19750P |
| 19750 | M | M.EcoPSJ29ORF36940P (100% identity) | CCANNNNNNNRTAYG | M.EcoB202ORF19750P |
| 19755 | S | S.EcoPE15ORF18630P (100% identity) | CCANNNNNNNRTAYG | S.EcoB202ORF19750P |
| 19760 | endoribonuclease SymE | |||
| 19985 | DUF4942 domain-containing protein | |||
| 19990 | M | M.SsoSE61ORF6540P (14% identity) | M1.EcoB202ORF19990P | |
| 19995 | IS3-like element IS3 family transposase | |||
| 20000 | M | M.EcoPSJ29ORF37430P (100% identity) | M2.EcoB202ORF19990P | |
| 20005 | S | S.EcoPSJ29ORF37430P (100% identity) | S.EcoB202ORF19990P | |
| 20010 | R | EcoPSJ29ORF37430P (100% identity) | EcoB202ORF19990P | |
| 20020 | NADPH-dependent aldehyde reductase Ahr | |||
| plasmid pTB422 | ||||
| 25515 | type II toxin-antitoxin system Phd/YefM family | |||
| 25520 | M | M.EcoPSS10ORF26960P (100% identity) | CCANNNNNNNRTAYG | M.EcoB202ORF25520P |
| 25525 | S | S.EcoPK8277ORF23015P (100% identity) | CCANNNNNNNRTAYG | S.EcoB202ORF25520P |
| 25530 | R | EcoRA119ORF26420P (99% identity) | CCANNNNNNNRTAYG | EcoB202ORF25520P |
| 25535 | 3-phosphatase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1655 | cell division protein DamX | |||
| 1660 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoB202DamP |
| 1665 | ribulose-phosphate 3-epimerase | |||
| 2285 | DUF2556 domain-containing protein | |||
| 2290 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.EcoB202ORF2290P |
| 2295 | DNA-binding transcriptional regulator Fis | |||
| 5610 | TraR/DksA family transcriptional regulator | |||
| 5615 | M | M.Eco20C09ORF6940P (85% identity) | M.EcoB202ORF5615P | |
| 5620 | LysB family phage lysis regulatory protein | |||
| 9370 | phosphohydrolase | |||
| 9375 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoB202DcmP |
| 9380 | V | V.SsoST152DcmP (100% identity) | V.EcoB202DcmP | |
| 9385 | drug/metabolite exporter YedA | |||
| 15110 | replication endonuclease | |||
| 15115 | M | M.EcoPE15ORF23185P (100% identity) | GATC | M.EcoB202ORF15115P |
| 15120 | TraR/DksA family transcriptional regulator | |||
| plasmid pTB422 | ||||
| 25285 | IS1 family transposase | |||
| 25290 | R | SflFF67ORF22305P (100% identity) | GCWGC | EcoB202ORF25290P |
| 25295 | XRE family transcriptional regulator | |||
| plasmid pTB423 | ||||
| 26045 | 226 aa hypothetical protein | |||
| 26050 | M | M.EcoM1586ORF26310P (99% identity) | M.EcoB202ORF26050P | |
| 26055 | glutamine--tRNA ligase | |||
| plasmid pTBMCR421 | ||||
| 23210 | 202 aa hypothetical protein | |||
| 23215 | M | M.YpsF1ORFBP (100% identity) | M.EcoB202ORF23215P | |
| 23220 | 108 aa hypothetical protein | |||
| 23715 | DUF1173 family protein | |||
| 23720 | M | M.YpsF1ORFCP (100% identity) | M.EcoB202ORF23720P | |
| 23725 | thermonuclease family protein | |||
| 24520 | 284 aa hypothetical protein | |||
| 24525 | M | M.YpsF1ORFDP (100% identity) | M.EcoB202ORF24525P | |
| 24530 | DNA-binding protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pTB422 | ||||
| 25415 | modulator protein | |||
| 25420 | M | M.Sen68045ORF16165P (98% identity) | M.EcoB202ORF25420P | |
| 25425 | R | Sen63ORFKP (99% identity) | EcoB202ORF25420P | |
| 25430 | maturation control protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19735 | GTPase | |||
| 19740 | R | EcoPSJ29MrrP (100% identity) | EcoB202Mrr2P | |
| ??? | Type I restriction enzyme EcoKI R protein HsdR | |||
| 19760 | endoribonuclease SymE | |||
| 19765 | R | EcoPSJ29McrBP (100% identity) | EcoB202McrB2P | |
| 19770 | R | EcoPSJ29McrCP (100% identity) | EcoB202McrC2P | |
| 19970 | HNH endonuclease | |||
| 19975 | R | EcoPSJ29McrC2P (100% identity) | EcoB202McrCP | |
| 19980 | R | EcoPSJ29McrB2P (100% identity) | EcoB202McrBP | |
| 19985 | DUF4942 domain-containing protein | |||