Escherichia coli ECZP248 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli ECZP248 RM systems
Ref: Tang,B. et al. unpublished
REBASE ref # 28103
| Sequence length: | GenBank #: | |
| Chromosome: | 4,481,825 bp | CP034784 |
| plasmid pTB402: | 143,706 bp | CP034786 |
| plasmid pTBMCR401: | 230,964 bp | CP034785 |
REBASE acronym: Eco248
Org_num: 33181
All begin ENE68_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pTB402 | ||||
| 23240 | 3-phosphatase | |||
| 23245 | R | EcoH45ORFAP (99% identity) | Eco248ORF23255P | |
| 23250 | S | S1.EcoP61ORF22960P (98% identity) | S.Eco248ORF23255P | |
| 23255 | M | M.Efe9LTORF43980P (99% identity) | M.Eco248ORF23255P | |
| 23260 | type II toxin-antitoxin system Phd/YefM family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1670 | cell division protein DamX | |||
| 1675 | M | adenine-specific DNA-methyltransferase | GATC | M.Eco248DamP |
| 1680 | ribulose-phosphate 3-epimerase | |||
| 2300 | DUF2556 domain-containing protein | |||
| 2305 | M | M.EcoSTEC509ORF2435P (100% identity) | M.Eco248ORF2305P | |
| 2310 | DNA-binding transcriptional regulator Fis | |||
| 7890 | 252 aa hypothetical protein | |||
| 7895 | R | EcoYSP81ORFBP (100% identity) | RCSRC | Eco248ORF7895P |
| 7900 | transcription factor | |||
| 8645 | phosphohydrolase | |||
| 8650 | M | M.EcoR5DcmP (100% identity) | CCWGG | M.Eco248DcmP |
| 8655 | V | V.EcoR5DcmP (100% identity) | V.Eco248DcmP | |
| 8660 | EamA family transporter | |||
| 17190 | LexA family transcriptional regulator | |||
| 17195 | M | M.SflFF80ORF18305P (100% identity) | GATC | M.Eco248ORF17195P |
| 17200 | PerC family transcriptional regulator | |||
| plasmid pTB402 | ||||
| 23620 | XRE family transcriptional regulator | |||
| 23625 | R | SflFF67ORF22305P (100% identity) | GCWGC | Eco248ORF23625P |
| 23630 | IS1 family transposase | |||
| plasmid pTBMCR401 | ||||
| 21940 | 202 aa hypothetical protein | |||
| 21945 | M | M.YpsF1ORFBP (100% identity) | M.Eco248ORF21945P | |
| 21950 | 108 aa hypothetical protein | |||
| 22340 | DUF1173 family protein | |||
| 22345 | M | M.YpsF1ORFCP (100% identity) | M.Eco248ORF22345P | |
| 22350 | thermonuclease family protein | |||
| 23125 | 0 aa hypothetical protein | |||
| 23130 | M | M.YpsF1ORFDP (100% identity) | M.Eco248ORF23130P | |
| 23135 | DNA-binding protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18920 | 100 aa hypothetical protein | |||
| 18925 | R | SflN116ORF19490P (100% identity) | GAACC | Eco248ORF18930P |
| ??? | M | M.EcoRS571ORF20935P (100% identity) | GAACC | M.Eco248ORF18930P |
| 18935 | DEAD/DEAH box helicase | |||