Bordetella species J329 |
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Putative Bordetella species J329 RM systems
Ref: Weigand,M.R. et al. unpublished
REBASE ref # 25537
Complete sequence: 3,925,525 bp
GenBank #: CP021250
REBASE acronym: BspJ329
Org_num: 33131
All begin CBF45_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5615 | ATP-dependent DNA helicase RecG | |||
| ??? | M | M1.Pst55ORF20210P (76% identity) | M1.BspJ329ORF5625P | |
| 5630 | M | M2.CspZM22ORF7890P (97% identity) | M2.BspJ329ORF5625P | |
| 5635 | S | S.PmeTTORFCP (40% identity) | S.BspJ329ORF5625P | |
| 5640 | R | SraA1ORF1441P (97% identity) | BspJ329ORF5625P | |
| 5645 | AAA family ATPase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4325 | 561 aa hypothetical protein | |||
| 4330 | V | V.Xci696ORF11815P (83% identity) | V.BspJ329ORF4335P | |
| 4335 | M | M.Pae115ORF3915P (88% identity) | M.BspJ329ORF4335P | |
| 4340 | DNA-binding protein | |||
| 6040 | aminoacyl-tRNA deacylase | |||
| 6045 | M | M.KgyCG1ORF5535P (86% identity) | M.BspJ329ORF6045P | |
| 6050 | R | KgyCG1ORF5535P (88% identity) | BspJ329ORF6045P | |
| 6055 | NAD(P)-dependent oxidoreductase | |||
| 6625 | 102 aa hypothetical protein | |||
| 6630 | R | Dsp20I (55% identity) | BspJ329ORF6630P | |
| 6635 | DedA family protein | |||
| 7310 | 118 aa hypothetical protein | |||
| 7315 | M | M.KgyKG01ORF10395P (77% identity) | M.BspJ329ORF7315P | |
| 7320 | RNA-binding protein | |||
| 12250 | RNA polymerase subunit sigma | |||
| 12255 | M | M2.RmaB10ORF3945P (95% identity) | M1.BspJ329ORF12255P | |
| 12260 | M | M2.Bvi1590ORF15435P (94% identity) | M2.BspJ329ORF12255P | |
| 12265 | 122 aa hypothetical protein | |||
| 12415 | glycoside hydrolase | |||
| 12420 | R | GbaDM2ORFDP (29% identity) | BspJ329ORF12420P | |
| ??? | 867 aa hypothetical protein | |||
| 12420 | 404 aa hypothetical protein | |||
| ??? | RM | RguNS21ORF11200P (45% identity) | BspJ329ORF12425P | |
| 12430 | 86 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5640 | DEAD/DEAH box helicase | |||
| 5645 | R | SraA1McrBP (98% identity) | BspJ329McrBP | |
| 5650 | R | Pspc21McrCP (93% identity) | BspJ329McrCP | |
| 5655 | 61 aa hypothetical protein | |||