Ralstonia solanacearum HA4-1 |
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Putative Ralstonia solanacearum HA4-1 RM systems
Ref: Tan,X. unpublished
REBASE ref # 28065
| Sequence length: | GenBank #: | |
| Chromosome: | 3,890,347 bp | CP022481 |
| plasmid HA4-1MP: | 1,947,245 bp | CP022482 |
REBASE acronym: Rso41
Org_num: 32982
All begin CFM90_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 16315 | Rrf2 family transcriptional regulator | |||
| 16320 | M | M.RsosSY1ORF7490P (100% identity) | M.Rso41ORF16320P | |
| ??? | R | RsoHA41ORFJP (100% identity) | Rso41ORF16320P | |
| 16335 | histidine kinase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5080 | tryptophan synthase subunit beta | |||
| 5085 | M | M.Rsp650ORF7450P (100% identity) | GTWWAC | M.Rso41ORF5085P |
| 5090 | tryptophan synthase subunit alpha | |||
| 9265 | phage tail protein | |||
| ??? | M | M.RsoHA41ORFBP (100% identity) | M.Rso41ORF9275P | |
| 9280 | 68 aa hypothetical protein | |||
| 10880 | type III effector HopG1 | |||
| ??? | M | M.RsoHA41ORFGP (100% identity) | M.Rso41ORF10885P | |
| 10895 | DNA-binding protein | |||
| 11010 | 80 aa hypothetical protein | |||
| 11015 | M | M1.RsoHA41ORFHP (88% identity) | M1.Rso41ORF11015P | |
| 11020 | M | M2.RsoHA41ORFHP (90% identity) | M2.Rso41ORF11015P | |
| 11025 | 135 aa hypothetical protein | |||
| 11615 | PIN domain-containing protein | |||
| ??? | M | M.RsoHA41ORFCP (100% identity) | M.Rso41ORF11620P | |
| 11625 | DNA-binding protein | |||
| 15065 | 831 aa hypothetical protein | |||
| 15070 | M | M.RsoHA41II (100% identity) | CTGCAG | M.Rso41ORF15070P |
| 15075 | 617 aa hypothetical protein | |||
| 16065 | abortive phage infection protein | |||
| ??? | V | V.RsoHA41ORFIP (100% identity) | V.Rso41ORF16075P | |
| 16075 | M | M.RsoHA41ORFIP (100% identity) | M.Rso41ORF16075P | |
| 16080 | transcriptional regulator | |||
| 17795 | Com family DNA-binding transcriptional | |||
| 17800 | M | M.RsoHA41ORFEP (100% identity) | M.Rso41ORF17800P | |
| 17810 | XRE family transcriptional regulator | |||
| plasmid HA4-1MP | ||||
| 19900 | type III secretion system effector protein | |||
| 19905 | M | M.RsosSY1ORF25025P (99% identity) | M.Rso41ORF19905P | |
| 19910 | mannose-binding lectin protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 16215 | guanosine-3,5-bis(diphosphate) | |||
| 16220 | R | RsoYQMrrP (100% identity) | Rso41MrrP | |
| 16225 | 0 aa hypothetical protein | |||