Salmonella enterica subsp. salamae serovar 42:r:- RSE42 |
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Putative Salmonella enterica subsp. salamae serovar 42:r:- RSE42 RM systems
Ref: Byukusenge,M. et al. unpublished
REBASE ref # 28068
Complete sequence: 4,861,251 bp
GenBank #: CP034697
REBASE acronym: SenE42
Org_num: 33006
All begin EL009_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 540 | DUF3987 domain-containing protein | |||
| 545 | M | M.SenE36ORF550P (100% identity) | CCANNNNNNNRTRTC | M.SenE42ORF545P |
| 550 | S | S.SenE36ORF550P (100% identity) | CCANNNNNNNRTRTC | S.SenE42ORF545P |
| 555 | chromosome segregation protein SMC | |||
| 20270 | restriction endonuclease | |||
| 20275 | R | SenE36ORF20205P (100% identity) | SenE42ORF20280P | |
| 20280 | M | M.SenE36ORF20205P (100% identity) | M.SenE42ORF20280P | |
| 20285 | S | S.SenE36ORF20205P (100% identity) | S.SenE42ORF20280P | |
| 20290 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1920 | cell division protein DamX | |||
| 1925 | M | M.SenSe29DamP (100% identity) | GATC | M.SenE42DamP |
| 1930 | ribulose-phosphate 3-epimerase | |||
| 2445 | DUF2556 domain-containing protein | |||
| 2450 | M | M.SenE36ORF2450P (100% identity) | ATGCAT | M.SenE42ORF2450P |
| 2455 | DNA-binding transcriptional regulator Fis | |||
| 9600 | phosphohydrolase | |||
| 9605 | M | M.SenE36DcmP (100% identity) | CCWGG | M.SenE42DcmP |
| 9610 | V | very short patch repair endonuclease | V.SenE42DcmP | |
| 9615 | drug/metabolite exporter YedA | |||
| 14940 | exonuclease | |||
| 14945 | M | M.SspsA7ORF8410P (100% identity) | GATC | M.SenE42ORF14945P |
| 14950 | DUF4060 family protein | |||
| 22125 | LexA family transcriptional regulator | |||
| 22130 | M | M2.SenUA36ORF1996P (100% identity) | M.SenE42ORF22130P | |
| 22135 | phage N-6-adenine-methyltransferase | |||
| 22130 | DNA cytosine methyltransferase | |||
| 22135 | M | M.SenE36ORF22055P (100% identity) | M.SenE42ORF22135P | |
| 22140 | PerC family transcriptional regulator | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 18260 | 33 aa hypothetical protein | |||
| 18265 | R | SenE36ORF18205P (100% identity) | CAGAG | SenE42ORF18270P |
| 18270 | M | M.SenE36ORF18205P (100% identity) | CAGAG | M.SenE42ORF18270P |
| 18275 | MFS transporter | |||