Salmonella enterica subsp. enterica serovar Typhimurium RSE04 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium RSE04 RM systems
Ref: Byukusenge,M. et al. unpublished
REBASE ref # 28068
| Sequence length: | GenBank #: | |
| Chromosome: | 4,766,197 bp | CP034719 |
| plasmid pRSE04: | 93,964 bp | CP034720 |
REBASE acronym: SenE04
Org_num: 33002
All begin ELZ71_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20200 | restriction endonuclease | |||
| 20205 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | SenE04ORF20210P |
| 20210 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.SenE04ORF20210P |
| 20215 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.SenE04ORF20210P |
| 20220 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1860 | cell division protein DamX | |||
| 1865 | M | M.StyTDamP (100% identity) | GATC | M.SenE04DamP |
| 1870 | ribulose-phosphate 3-epimerase | |||
| 2355 | DUF2556 domain-containing protein | |||
| 2360 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenE04ORF2360P |
| 2365 | DNA-binding transcriptional regulator Fis | |||
| 6175 | PerC family transcriptional regulator | |||
| 6180 | M | M.Sty13348ORF110P (100% identity) | M.SenE04ORF6180P | |
| 6185 | RusA family crossover junction | |||
| 9545 | phosphohydrolase | |||
| 9550 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.SenE04DcmP |
| 9555 | V | V.StyUK1DcmP (100% identity) | V.SenE04DcmP | |
| 9560 | drug/metabolite exporter YedA | |||
| 20380 | BREX system P-loop protein BrxC | |||
| 20385 | RM | StyUK1IV (100% identity) | GATCAG | SenE04ORF20385P |
| 20390 | ATP-binding protein | |||
| plasmid pRSE04 | ||||
| 24170 | 73 aa hypothetical protein | |||
| 24175 | M | M.StyUK1ORFAP (100% identity) | M.SenE04ORF24175P | |
| 24180 | 62 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17925 | 33 aa hypothetical protein | |||
| 17930 | R | StyUK1IP (99% identity) | CAGAG | SenE04ORF17935P |
| 17935 | M | M.StyUK1I (100% identity) | CAGAG | M.SenE04ORF17935P |
| 17940 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20195 | BrnT family toxin | |||
| 20200 | R | StyUK1MrrP (100% identity) | SenE04MrrP | |
| 20205 | type I restriction-modification system | |||