Salmonella enterica subsp. enterica serovar Karamoja RSE40 |
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Putative Salmonella enterica subsp. enterica serovar Karamoja RSE40 RM systems
Ref: Byukusenge,M. et al. unpublished
REBASE ref # 28068
| Sequence length: | GenBank #: | |
| Chromosome: | 4,768,681 bp | CP034698 |
| plasmid pRSE40: | 193,615 bp | CP034699 |
REBASE acronym: SenE40
Org_num: 32991
All begin EL007_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1840 | cell division protein DamX | |||
| 1845 | M | M.StyTDamP (100% identity) | GATC | M.SenE40DamP |
| 1850 | ribulose-phosphate 3-epimerase | |||
| 2325 | DUF2556 domain-containing protein | |||
| 2330 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenE40ORF2330P |
| 2335 | DNA-binding transcriptional regulator Fis | |||
| 5730 | TraR/DksA family transcriptional regulator | |||
| 5735 | M | M.SenE21ORF5725P (100% identity) | M.SenE40ORF5735P | |
| 5740 | replication endonuclease | |||
| 9325 | phosphohydrolase | |||
| 9330 | M | M.Sens29927DcmP (100% identity) | CCWGG | M.SenE40DcmP |
| 9335 | V | V.StyUK1DcmP (100% identity) | V.SenE40DcmP | |
| 9340 | drug/metabolite exporter YedA | |||
| 14305 | 112 aa hypothetical protein | |||
| 14310 | M | M.SenE21ORF14305P (100% identity) | M.SenE40ORF14310P | |
| 14315 | class I SAM-dependent methyltransferase | |||
| 14310 | DNA cytosine methyltransferase | |||
| 14315 | M | M.SenE21ORF14310P (100% identity) | M.SenE40ORF14315P | |
| 14320 | adenine methylase | |||
| 14315 | class I SAM-dependent methyltransferase | |||
| 14320 | M | M.SenE21ORF14315P (100% identity) | M.SenE40ORF14320P | |
| 14325 | 82 aa hypothetical protein | |||
| 20475 | 61 aa hypothetical protein | |||
| 20480 | R | SenS922ORF19305P (100% identity) | CAGCTG | SenE40ORF20490P |
| 20485 | C | C.SptAI (100% identity) | C.SenE40ORF20490P | |
| 20490 | M | M.SptAI (100% identity) | CAGCTG | M.SenE40ORF20490P |
| 20495 | DUF4102 domain-containing protein | |||
| plasmid pRSE40 | ||||
| 23800 | 67 aa hypothetical protein | |||
| 23805 | M | M.SenE21ORF24035P (100% identity) | M.SenE40ORF23805P | |
| 23810 | 73 aa hypothetical protein | |||
| 24070 | 254 aa hypothetical protein | |||
| 24075 | M | DNA (cytosine-5-)-methyltransferase | M.SenE40ORF24075P | |
| 24080 | ribbon-helix-helix protein, CopG family | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18100 | 33 aa hypothetical protein | |||
| ??? | R | SenFFLORFCP (100% identity) | CAGAG | SenE40ORF18110P |
| 18110 | M | M.SenS316II (100% identity) | CAGAG | M.SenE40ORF18110P |
| 18115 | MFS transporter | |||