Escherichia coli EC17GD31 |
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Putative Escherichia coli EC17GD31 RM systems
Ref: Le-Vo,H.-N. et al. unpublished
REBASE ref # 28030
| Sequence length: | GenBank #: | |
| Chromosome: | 4,975,832 bp | CP031293 |
| plasmid pGD31-F1928: | 245,305 bp | CP031295 |
| plasmid pGD31-F25: | 110,686 bp | CP031294 |
| plasmid pGD31-NDM: | 188,230 bp | CP031297 |
REBASE acronym: EcoGD31
Org_num: 32878
All begin DWB25_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21800 | restriction endonuclease subunit M | |||
| 21805 | R | EcoWW2ORF20190P (100% identity) | CCCNNNNNGTG | EcoGD31ORF21815P |
| 21810 | S | S.SflLIN11ORF19980P (100% identity) | CCCNNNNNGTG | S.EcoGD31ORF21815P |
| 21815 | M | M2.SflLIN11ORF19980P (100% identity) | CCCNNNNNGTG | M2.EcoGD31ORF21815P |
| 21820 | M | M1.EcoWW2ORF20190P (100% identity) | CCCNNNNNGTG | M1.EcoGD31ORF21815P |
| 21825 | toll/interleukin-1 receptor domain-containing | |||
| plasmid pGD31-F25 | ||||
| 25735 | 0 aa hypothetical protein | |||
| 25740 | M | M.Ecoi162ORF4671P (100% identity) | GAANNNNNNTAYG | M.EcoGD31ORF25740P |
| 25745 | S | S.EcoE31ORFEP (100% identity) | GAANNNNNNTAYG | S.EcoGD31ORF25740P |
| 25750 | R | Ecoi162ORF4671P (99% identity) | GAANNNNNNTAYG | EcoGD31ORF25740P |
| 25755 | 0 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2245 | cell division protein DamX | |||
| 2250 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoGD31DamP |
| 2255 | ribulose-phosphate 3-epimerase | |||
| 2810 | DUF2556 domain-containing protein | |||
| 2815 | M | M.EspP079ORF3959P (100% identity) | ATGCAT | M.EcoGD31ORF2815P |
| 2820 | Fis family transcriptional regulator | |||
| 14465 | drug/metabolite exporter YedA | |||
| 14470 | V | V.EcoWW2DcmP (100% identity) | V.EcoGD31DcmP | |
| 14475 | M | M.EcoWW2DcmP (100% identity) | CCWGG | M.EcoGD31DcmP |
| 14480 | phosphohydrolase | |||
| 15415 | NinE family protein | |||
| 15420 | M | M.EcoC4169ORF4022P (100% identity) | GATC | M.EcoGD31ORF15420P |
| 15425 | recombination protein NinB | |||
| 18390 | DUF1317 family protein | |||
| 18395 | M | M.EfeC13ORF14690P (100% identity) | M.EcoGD31ORF18395P | |
| 18400 | cell division protein ZapA | |||
| plasmid pGD31-F1928 | ||||
| 26350 | 0 aa hypothetical protein | |||
| 26355 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoGD31ORF26355P |
| 26360 | 73 aa hypothetical protein | |||
| plasmid pGD31-NDM | ||||
| 28120 | 120 aa hypothetical protein | |||
| 28125 | M | M.Sma1978ORFAP (97% identity) | M.EcoGD31ORF28125P | |
| 28130 | 149 aa hypothetical protein | |||
| 28465 | 100 aa hypothetical protein | |||
| 28470 | M | M.YrupYR1ORFCP (100% identity) | M.EcoGD31ORF28470P | |
| 28475 | 158 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pGD31-F25 | ||||
| 25800 | 76 aa hypothetical protein | |||
| 25805 | M | M.Sso524ORF460P (100% identity) | M.EcoGD31ORF25805P | |
| 25810 | 269 aa hypothetical protein | |||