Cellulosilyticum species WCF-2 |
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Putative Cellulosilyticum species WCF-2 RM systems
Ref: Ahn,J.-H. et al. unpublished
REBASE ref # 27996
Complete sequence: 4,779,774 bp
GenBank #: CP034675
REBASE acronym: CspWCF2
Org_num: 32831
All begin EKH84_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| ??? | M | M.Rpe698ORFCP (88% identity) | ACTNNNNNNGGT | M.CspWCF2I |
| ??? | S | S.BspGD8ORFFP (59% identity) | ACTNNNNNNGGT | S.CspWCF2I |
| ??? | R | CgaBS1IIP (82% identity) | ACTNNNNNNGGT | CspWCF2IP |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2030 | tyrosine-type recombinase/integrase | |||
| 2035 | M | M.Cpe8ORF15615P (80% identity) | M.CspWCF2ORFAP | |
| 2040 | 138 aa hypothetical protein | |||
| 4255 | AAA family ATPase | |||
| 4260 | R | NdrJC05DptFP (31% identity) | CspWCF2DptFP | |
| 4265 | DNA phosphorothioation-dependent restriction | |||
| 4260 | DNA phosphorothioation-dependent restriction | |||
| 4265 | R | Tsp8C15bDptGP (27% identity) | CspWCF2DptGP | |
| ??? | DNA phosphorothioation-dependent restriction protein DptH | |||
| 4265 | DNA phosphorothioation-dependent restriction | |||
| ??? | R | Cne265DptHP (44% identity) | CspWCF2DptHP | |
| 4275 | DUF262 domain-containing protein | |||
| 4290 | 426 aa hypothetical protein | |||
| 4295 | M | M.BspISO11DndAP (41% identity) | M.CspWCF2DndAP | |
| 4300 | DNA sulfur modification protein DndE | |||
| 4295 | cysteine desulfurase | |||
| 4300 | M | M.Bmy081DndEP (43% identity) | M.CspWCF2DndEP | |
| 4305 | DNA sulfur modification protein DndD | |||
| 4300 | DNA sulfur modification protein DndE | |||
| 4305 | M | M.GbaSANADndDP (21% identity) | M.CspWCF2DndDP | |
| 4310 | DNA phosphorothioation system sulfurtransferase | |||
| 4305 | DNA sulfur modification protein DndD | |||
| 4310 | M | M.EcotcmA3DndC2P (23% identity) | M.CspWCF2DndCP | |
| 4315 | DNA sulfur modification protein DndB | |||
| 4310 | DNA phosphorothioation system sulfurtransferase | |||
| 4315 | M | M.Cne265DndBP (52% identity) | M.CspWCF2DndBP | |
| 4320 | 185 aa hypothetical protein | |||
| ??? | DNA modification methylase | |||
| ??? | M | M1.Tcr6911ORF13750P (76% identity) | M.CspWCF2ORFFP | |
| ??? | M | M2.CthORF1728P (62% identity) | M.CspWCF2ORFEP | |
| ??? | DNA -methyltransferase | |||
| 20160 | 293 aa hypothetical protein | |||
| ??? | M | M.Lru27782ORF5210P (83% identity) | M.CspWCF2ORFCP | |
| ??? | DNA -methyltransferase | |||
| ??? | DNA -methyltransferase | |||
| ??? | M | M1.LpeLG4ORF480P (56% identity) | M.CspWCF2ORFDP | |
| 20170 | 64 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4355 | (deoxy)nucleoside triphosphate | |||
| 4360 | R | Cle5427ORF238P (95% identity) | CspWCF2ORFGP | |
| 4365 | 280 aa hypothetical protein | |||
| 15220 | NAD-dependent protein deacylase | |||
| 15225 | R | Cle5427McrCP (97% identity) | CspWCF2McrCP | |
| 15230 | R | Cle5427McrBP (100% identity) | CspWCF2McrBP | |
| 15235 | DEAD/DEAH box helicase | |||