Salmonella enterica subsp. enterica serovar Heidelberg CFSAN067218 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica subsp. enterica serovar Heidelberg CFSAN067218 RM systems
Ref: Hoffman,M. et al. unpublished
REBASE ref # 27984
| Sequence length: | GenBank #: | |
| Chromosome: | 4,793,457 bp | CP028311 |
| plasmid pSH-04-1: | 117,928 bp | CP028312 |
REBASE acronym: Sen67218
Org_num: 32748
All begin C7X11_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20900 | restriction endonuclease | |||
| 20905 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen67218ORF20910P |
| 20910 | M | M.Sens12373ORF19415P (100% identity) | GAGNNNNNNRTAYG | M.Sen67218ORF20910P |
| 20915 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen67218ORF20910P |
| 20920 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1940 | cell division protein DamX | |||
| 1945 | M | M.StyTDamP (100% identity) | GATC | M.Sen67218DamP |
| 1950 | ribulose-phosphate 3-epimerase | |||
| 2445 | DUF2556 domain-containing protein | |||
| 2450 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen67218ORF2450P |
| 2455 | Fis family transcriptional regulator | |||
| 9575 | phosphohydrolase | |||
| 9580 | M | M.SenZ223DcmP (100% identity) | CCWGG | M.Sen67218DcmP |
| 9585 | V | V.StyTDcmP (100% identity) | V.Sen67218DcmP | |
| 9590 | drug/metabolite exporter YedA | |||
| 14950 | exonuclease | |||
| 14955 | M | M.Sens12373ORF14090P (100% identity) | GATC | M.Sen67218ORF14955P |
| 14960 | DUF4060 domain-containing protein | |||
| 21100 | RM | Sens12373ORF19575P (100% identity) | GATCAG | Sen67218ORF21100P |
| 21105 | ATP-dependent helicase | |||
| plasmid pSH-04-1 | ||||
| 24865 | IS1 family transposase | |||
| 24870 | M | M.Ubap201ORF4P (100% identity) | CCWGG | M.Sen67218ORF24870P |
| 24875 | R | Ubap201ORF4P (100% identity) | CCWGG | Sen67218ORF24870P |
| 24880 | IS6 family transposase IS15DIV | |||
| 25055 | 101 aa hypothetical protein | |||
| 25060 | M | M.SspPIBORF23080P (100% identity) | M.Sen67218ORF25060P | |
| 25065 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18215 | 33 aa hypothetical protein | |||
| 18220 | R | Sens12373ORF17180P (100% identity) | CAGAG | Sen67218ORF18225P |
| 18225 | M | M.SenZ223ORF2150P (100% identity) | CAGAG | M.Sen67218ORF18225P |
| 18230 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20895 | 95 aa hypothetical protein | |||
| 20900 | R | StyUK1MrrP (100% identity) | Sen67218MrrP | |
| 20905 | type I restriction-modification system | |||