Lactobacillus amylovorus GRL 1112 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Lactobacillus amylovorus GRL 1112 RM systems
Ref: Kant,R. et al. unpublished
REBASE ref # 12389
| Sequence length: | GenBank #: | |
| Chromosome: | 2,067,702 bp | CP002338 (NC_014724) |
| plasmid plasmid2: | 25,284 bp | CP002613 (NC_015322) |
REBASE acronym: LamGRL
Org_num: 6432
All begin LA2_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5400 | RpiR family regulatory protein | |||
| 5415 | M | M.LamL4ORF30P (96% identity) | M.LamGRLORF5415P | |
| 5420 | S | specificity determinant HsdS | S1.LamGRLORF5415P | |
| 5425 | Phage integrase | |||
| 5430 | S | S1.Lac13120ORF810P (35% identity) | S2.LamGRLORF5415P | |
| 5435 | R | LacN20ORF6265P (98% identity) | LamGRLORF5415P | |
| 5440 | 92 aa hypothetical protein | |||
| 8105 | 697 aa hypothetical protein | |||
| 8110 | R | Lam1118ORF7135P (96% identity) | LamGRLORF8135P | |
| 8115 | S | S2.Lam1118ORF7135P (49% identity) | S1.LamGRLORF8135P | |
| 8120 | phage integrase family protein | |||
| ??? | S | S2.Lam1118ORF7135P (57% identity) | S2.LamGRLORF8135P | |
| 8135 | M | M.Lam1118ORF7135P (99% identity) | M.LamGRLORF8135P | |
| 8140 | 137 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 185 | acetyltransferase | |||
| 190 | R | LamS1ORFEP (100% identity) | LamGRLORF190P | |
| 195 | cytosol non-specific dipeptidase | |||
| 3895 | 167 aa hypothetical protein | |||
| 3900 | RM | Lfe6620ORF640P (40% identity) | LamGRLORF3900AP | |
| 3905 | transposase IS66 | |||
| 3910 | transposase | |||
| 3915 | 57 aa hypothetical protein | |||
| 3920 | RM | Lde202ORF5175P (23% identity) | LamGRLORF3900BP | |
| 3925 | restriction endonuclease | |||
| 3925 | restriction endonuclease | |||
| 3930 | M | M.Leq0697ORFDP (60% identity) | M.LamGRLORF3930P | |
| 3935 | 362 aa hypothetical protein | |||
| plasmid plasmid2 | ||||
| 11214 | 152 aa hypothetical protein | |||
| 11219 | R | Lre121ORF440P (68% identity) | GCNGC | LamGRLORF11224P |
| 11224 | M | M.LjoKD1ORF9185P (84% identity) | GCNGC | M.LamGRLORF11224P |
| 11229 | V | V.LreKCA2ORF880P (65% identity) | V.LamGRLORF11224P | |
| 11234 | 69 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid plasmid2 | ||||
| 11149 | 152 aa hypothetical protein | |||
| 11154 | R | Lre55730ORFCP (39% identity) | LamGRLORF11159P | |
| 11159 | M | M.Lre225ORF8240P (60% identity) | M.LamGRLORF11159P | |
| 11164 | 192 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 305 | Exodeoxyribonuclease III | |||
| 325 | R | Lam1118ORF260P (99% identity) | LamGRLORF325P | |
| 330 | penicillin-binding protein | |||
| 3920 | superfamily II DNA/RNA helicase | |||
| 3925 | R | Lsa30AMrrP (51% identity) | LamGRLMrrP | |
| 3930 | DNA methyltransferase | |||
| 8100 | 136 aa hypothetical protein | |||
| 8105 | R | Lam1118GmrSDP (99% identity) | LamGRLGmrSDP | |
| 8110 | type III restriction protein, res subunit | |||