Escherichia coli NCTC9033 |
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Putative Escherichia coli NCTC9033 RM systems
Ref:
REBASE ref # 22501
Complete sequence: 5,249,174 bp
GenBank #: LR134081
REBASE acronym: Eco9033
Org_num: 32693
All begin NCTC9033_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4933 | methylated adenine and cytosine restriction | |||
| ??? | R | Ssp28760ORF3465P (99% identity) | TGANNNNNNNNTGCT | Eco9033IP |
| 4937 | M | M.Ssp28760ORF3465P (100% identity) | TGANNNNNNNNTGCT | M.Eco9033I |
| 4938 | S | S.EcosBORF22035P (100% identity) | TGANNNNNNNNTGCT | S.Eco9033I |
| 4940 | 5-methylcytosine-specific restriction enzyme | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 480 | DamX protein | |||
| 481 | M | M.Eco9089DamP (95% identity) | GATC | M.Eco9033Dam |
| 482 | ribulose-phosphate 3-epimerase | |||
| 588 | membrane protein | |||
| 589 | M | M.SdyFF51ORF20390P (100% identity) | ATGCAT | M.Eco9033ORF589P |
| 590 | DNA-binding protein Fis | |||
| 1000 | TraG-like protein, N-terminal region | |||
| 1001 | M | M.EcosS3ORF15775P (100% identity) | M.Eco9033ORF1001P | |
| 1002 | ATPase | |||
| 3394 | methyl-independent mismatch repair | |||
| 3396 | V | V.SdySWHE2DcmP (100% identity) | V.Eco9033DcmP | |
| 3397 | M | M.SflLIN6DcmP (99% identity) | CCWGG | M.Eco9033DcmP |
| 3398 | phosphohydrolase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4932 | GTP-binding protein YjiA | |||
| 4933 | R | Ssp28760MrrP (88% identity) | Eco9033MrrP | |
| 4934 | type I restriction enzyme EcoKI subunit R | |||
| 4938 | specificity determinant for hsdM and hsdR | |||
| 4940 | R | EcoSTEC346McrBP (100% identity) | Eco9033McrBP | |
| 4941 | R | Ssp28760McrCP (100% identity) | Eco9033McrCP | |
| 4942 | DEAD-box helicase-like protein | |||