|
Putative Haemophilus influenzae NCTC11873 RM systems
Ref:
REBASE ref # 22501
Complete sequence: 1,948,880 bp
GenBank #: LR134490
REBASE acronym: Hin11873
Org_num: 32635
All begin NCTC11873_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
422 | ATP-dependent DNA helicase Rep | |||
423 | R | Hin8883ORF8820P (100% identity) | TTGANNNNNNNTTYG | Hin11873IIP |
424 | S | S.Hin8883ORF8820P (100% identity) | TTGANNNNNNNTTYG | S.Hin11873II |
425 | M | M.Hin8883ORF8820P (87% identity) | TTGANNNNNNNTTYG | M.Hin11873II |
426 | SAM-dependent methyltransferase | |||
856 | inner membrane protein | |||
??? | R | Aur10221ORF467P (98% identity) | Hin11873ORF862P | |
859 | Abi family protein | |||
860 | S | S1.Hin3043ORF5600P (99% identity) | S1.Hin11873ORF862P | |
861 | S | S.Hin375II (47% identity) | S2.Hin11873ORF862P | |
862 | M | M.Hin375II (100% identity) | M.Hin11873ORF862P | |
863 | oligopeptidase A | |||
1020 | Signal Recognition Particle (SRP) component with | |||
1021 | R | Hin3047ORF3790P (98% identity) | ATGNNNNNNGTC | Hin11873IP |
1022 | S | S.HinNTHORFYP (67% identity) | ATGNNNNNNGTC | S.Hin11873I |
1023 | transcriptional regulator containing an hth | |||
1024 | M | M.HinII4ORF8830P (100% identity) | ATGNNNNNNGTC | M.Hin11873I |
1025 | NIF3-like protein | |||
1367 | translation initiation factor IF-2 | |||
1368 | R | HinIII7ORF12840P (98% identity) | Hin11873ORF1373P | |
1369 | Uncharacterised protein | |||
1370 | Uncharacterised protein | |||
1371 | FRG domain | |||
1372 | S | S.HinP3EMOORF3665P (62% identity) | S.Hin11873ORF1373P | |
??? | M | M.Hin7661ORF6515P (99% identity) | M.Hin11873ORF1373P | |
1374 | 30s ribosome binding factor | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
1357 | Uncharacterised protein | |||
1358 | M | M.Hin1900002ORF735P (99% identity) | M.Hin11873ORF1358P | |
1359 | Probable bacteriophage replication protein A | |||
1519 | protein involved in chromosome partitioning | |||
1520 | R | HinV1ORF15060P (100% identity) | RGCGCY | Hin11873ORF1521P |
1521 | M | M.HinV1ORF15060P (100% identity) | RGCGCY | M.Hin11873ORF1521P |
1522 | condesin subunit F | |||
1644 | phage replication protein | |||
1645 | M | M.Hin8759ORF7955P (100% identity) | M.Hin11873ORF1645P | |
1646 | recombination protein NinB | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
371 | regulator of ribonuclease activity B | |||
372 | R | HinV2ORF3260P (100% identity) | Hin11873ORF373P | |
373 | M | M.HinV3ORF3780P (100% identity) | M.Hin11873ORF373P | |
374 | type iii restriction-modification system | |||
1904 | ribonuclease HII, degrades RNA of DNA-RNA | |||
1905 | M | M.Hin2866I (99% identity) | CCTAC | M.Hin11873III |
1906 | R | HinV3ORF18120P (100% identity) | CCTAC | Hin11873IIIP |
1907 | gamma-carboxymuconolactone decarboxylase | |||
Orphan M | ||||
ORF | Gene | Most similar | Specificity | Name |
867 | phosphatidylglycerophosphatase B | |||
868 | M | M.HinV1ORF8910P (100% identity) | GATC | M.Hin11873ORF868P |
869 | 3-dehydroquinate synthase | |||
966 | Uncharacterised protein | |||
967 | M | M.HinV3ORF10190P (100% identity) | GATC | M.Hin11873ORF967P |
968 | Antitoxin HicB |