Ref:

REBASE ref # 22501

Complete sequence: 1,671,550 bp

GenBank #: LR134372

REBASE acronym: Cup11541

Org_num: 32463

 

All begin NCTC11541_

Type I
ORF Gene Most similar Specificity Name
 
313 glucose inhibited division protein B
??? R HciP01DORFHP (87% identity) Cup11541ORF316P
316 M M.HbiAAQJHORF8670P (91% identity) M.Cup11541ORF316P
317 S S.Cup14913ORF294P (76% identity) S.Cup11541ORF316P
318 tRNA
 
802 Sec-independent protein translocase protein
803 S Cup3940ORF767P (22% identity) S1.Cup11541ORF803P
804 S S.Cup14913ORF785P (30% identity) S2.Cup11541ORF803P
805 Undecaprenyl diphosphate synthase
 
1104 UDP-N-acetylmuramate--L-alanine ligase
1105 R Che9613ORF3135P (94% identity) Cup11541ORF1107P
1106 S S.Che9613ORF3135P (67% identity) S.Cup11541ORF1107P
1107 M M.Che9613ORF3135P (96% identity) M.Cup11541ORF1107P
1109 integral membrane protein
 
1172 Menaquinone via futalosine step 3
1173 S S.Hsp6242ORF2455P (38% identity) S.Cup11541ORF1174P
1174 M M.Hsp6242ORF2455P (77% identity) M.Cup11541ORF1174P
1175 pyridoxamine 5-phosphate oxidase
 
1650 translocation protein TolB
1651 M M.Cup11840ORF1616P (92% identity) M.Cup11541ORF1651P
1652 R Cup11840ORF1616P (95% identity) Cup11541ORF1651P
1653 S S1.Cup197059ORF1587P (53% identity) S.Cup11541ORF1651P
1654 periplasmic protein TonB
Type II
ORF Gene Most similar Specificity Name
 
379 Thioredoxin
380 R Cup197059ORF387P (98% identity) Cup11541ORF381P
381 M M.Cup197059ORF387P (98% identity) M.Cup11541ORF381P
382 Crp/Fnr family transcriptional regulator
 
575 Protein export cytoplasm protein SecA ATPase RNA
576 RM Che9613ORF9260P (72% identity) Cup11541ORF576P
577 S S.Che9613ORF9260P (43% identity) S.Cup11541ORF576P
578 permease
 
637 succinyl-diaminopimelate desuccinylase
638 RM Cup3940ORF610P (99% identity) Cup11541ORF638P
639 Sulfur carrier protein ThiS
 
753 membrane protein
754 R Che9613ORF2625P (97% identity) Cup11541ORF755P
755 M M.Hci12221IV (96% identity) M.Cup11541ORF755P
756 Phosphate ABC transporter, periplasmic
 
801 Uncharacterised protein
802 RM Csp25113ORF876P (63% identity) Cup11541ORF802P
803 Restriction enzyme BgcI subunit beta
 
985 Ribbon-helix-helix protein, copG family
986 RM Hwi430ORFOP (35% identity) Cup11541ORF986P
987 Glycerophosphoryl diester phosphodiesterase
 
1068 Uncharacterised protein
1069 M M.Csp25113ORF614P (95% identity) ACNGT M.Cup11541III
??? R Cup11840VIP (89% identity) ACNGT Cup11541IIIP
1072 Chorismate mutase I / Prephenate dehydratase
 
1426 Imidazole glycerol phosphate synthase
1427 M M.Csp6879ORF3090P (78% identity) GANTC M.Cup11541II
1428 R Csp6879ORF3090P (80% identity) GANTC Cup11541IIP
1429 imidazole glycerol-phosphate
 
1703 N-acetyl-gamma-glutamyl-phosphate reductase
1704 M M.Cup6824ORF7900P (98% identity) RAATTY M.Cup11541I
1705 R Cup12264ORF1828P (99% identity) RAATTY Cup11541IP
1706 Translation initiation factor 3
 
1716 Uncharacterised protein
1717 M M.Cup6824ORF7945P (83% identity) M.Cup11541ORF1717P
1718 Uncharacterised protein
 
1719 Glutamate synthase [NADPH] large chain
1720 M M.Cup3940ORF1640P (95% identity) M.Cup11541ORF1720P
1721 R Cup3940ORF1640P (98% identity) Cup11541ORF1720P
1722 Glutamate synthase [NADPH] small chain
 
1724 ribosomal pseudouridine synthase
1725 M M.Hbi43879ORF490P (95% identity) GATGC M1.Cup11541IV
1726 M M.Che9613ORF6915P (93% identity) GATGC M2.Cup11541IV
??? R Hmu12714IIP (76% identity) GATGC Cup11541IVP
1729 Holliday junction resolvase
Type III
ORF Gene Most similar Specificity Name
 
548 Uncharacterised protein
549 M M.HciP01DORFB1P (65% identity) M.Cup11541ORF549P
550 Uncharacterised protein
551 Virulence protein
552 R HciORF61P (68% identity) Cup11541ORF549P
553 Lipid-A-disaccharide synthase; CAzY