Neisseria gonorrhoeae NCTC13484 |
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Putative Neisseria gonorrhoeae NCTC13484 RM systems
Ref:
REBASE ref # 22501
Complete sequence: 2,190,946 bp
GenBank #: LR134358
REBASE acronym: Ngo13484
Org_num: 32478
All begin NCTC13484_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 868 | bifunctional 3,4-dihydroxy-2-butanone | |||
| 869 | M | M.NgoWSI (100% identity) | GAGNNNNNTAC | M.Ngo13484II |
| 870 | Uncharacterised protein | |||
| 871 | Uncharacterised protein | |||
| 872 | S | S.Ngos1291I (100% identity) | GAGNNNNNTAC | S.Ngo13484II |
| 873 | DNA-binding protein | |||
| 874 | R | NgoWPIP (100% identity) | GAGNNNNNTAC | Ngo13484IIP |
| 875 | recombination factor protein RarA | |||
| 1163 | ATP-dependent protease ATP-binding protein | |||
| 1164 | R | NgoWSIIP (100% identity) | Ngo13484ORF1168P | |
| 1165 | S | S2.NgoWSII (100% identity) | S1.Ngo13484ORF1168P | |
| 1166 | S | restriction modification system DNA specificity | S2.Ngo13484ORF1168P | |
| ??? | S | S1.NgoWPORF494P (100% identity) | S3.Ngo13484ORF1168P | |
| 1167 | DNA-damage-inducible protein D | |||
| ??? | M | M.NgoJH7ORFLP (100% identity) | M.Ngo13484ORF1168P | |
| 1170 | ADP-L-glycero-D-manno-heptose-6-epimerase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4 | Uncharacterised protein | |||
| ??? | M | M.NgoSH240ORFLP (100% identity) | M.Ngo13484ORF5P | |
| ??? | R | NgoWSORF1801P (98% identity) | Ngo13484ORF5P | |
| 9 | V | V.Ngos1291ORF65P (100% identity) | V.Ngo13484ORF5P | |
| 10 | phage replication initiation protein | |||
| 704 | phosphoribosylaminoimidazole carboxylase ATPase | |||
| 705 | R | Ngos1291ORF10080P (100% identity) | GCCGGC | Ngo13484ORF706P |
| 706 | M | M.Ngos1291ORF10080P (100% identity) | GCCGGC | M.Ngo13484ORF706P |
| 707 | anthranilate synthase component I | |||
| 897 | 3-isopropylmalate dehydratase small | |||
| 898 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.Ngo13484ORF898P |
| ??? | R | NgoWPORF778P (100% identity) | GGNNCC | Ngo13484ORF898P |
| 901 | 3-isopropylmalate dehydrogenase | |||
| 1207 | Uncharacterised protein | |||
| 1208 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.Ngo13484ORF1208P |
| 1209 | R | Ngos1291ORF7560P (100% identity) | GCSGC | Ngo13484ORF1208P |
| 1210 | H | H.Ngos1291ORF7560P (100% identity) | H.Ngo13484ORF1208P | |
| 1211 | uroporphyrinogen decarboxylase | |||
| 1215 | secreted protein | |||
| 1216 | S | S.NgoWSORF450P (100% identity) | GACNNNNNTGA | S.Ngo13484ORF1217P |
| 1217 | RM | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | Ngo13484ORF1217P |
| 1218 | Transposase and inactivated derivatives | |||
| 1271 | phenylalanyl-tRNA synthetase subunit beta | |||
| 1272 | R | NgoWSORF391P (100% identity) | Ngo13484ORF1274P | |
| ??? | M | M.NgoWSORF391P (100% identity) | M.Ngo13484ORF1274P | |
| 1275 | V | V.NgoWSORF391P (100% identity) | V.Ngo13484ORF1274P | |
| 1276 | phenylalanyl-tRNA synthetase subunit alpha | |||
| 1398 | excinuclease ABC subunit A | |||
| 1399 | R | Ngos1291ORF260P (100% identity) | CCGCGG | Ngo13484ORF1400P |
| 1400 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.Ngo13484ORF1400P |
| 1401 | type I restriction-modification system | |||
| 1630 | Uncharacterised protein | |||
| 1631 | M | modification methylase DpnIIB | M.Ngo13484ORF1631P | |
| 1632 | type II restriction endonuclease | |||
| 1631 | modification methylase DpnIIB | |||
| 1632 | R | Ngos1291ORF5750P (100% identity) | GATC | Ngo13484ORF1632P |
| 1633 | leucyl-tRNA synthetase | |||
| 1794 | integral membrane protein | |||
| ??? | R | NgoWSORF2276P (100% identity) | GGCC | Ngo13484ORF1797P |
| 1797 | M | M.NgoWPORF2222P (100% identity) | GGCC | M.Ngo13484ORF1797P |
| 1798 | ribosome recycling factor | |||
| 1901 | glutamate permease | |||
| 1902 | R | NgoWSIIIP (100% identity) | GGTGA | Ngo13484IIIP |
| 1903 | M | M1.Ngos1291II (100% identity) | GGTGA | M1.Ngo13484III |
| 1904 | M | M1.NgoWSIII (100% identity) | GGTGA | M2.Ngo13484III |
| 1905 | transcriptional accessory protein Tex | |||
| 2006 | GTPase ObgE | |||
| 2007 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.Ngo13484ORF2007P |
| 2008 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | Ngo13484ORF2007P |
| 2009 | protein CysS | |||
| 2245 | Uncharacterised protein | |||
| ??? | M | M.NgoJH7ORFGP (100% identity) | M.Ngo13484ORF2246P | |
| ??? | R | NgoTFGB2ORF1219P (100% identity) | Ngo13484ORF2246P | |
| 2249 | V | V.Ngos1291ORF65P (100% identity) | V.Ngo13484ORF2246P | |
| 2250 | phage replication initiation protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 931 | tRNA pseudouridine synthase B | |||
| ??? | M | M.NgoFQ84ORFAP (99% identity) | M.Ngo13484ORF932P | |
| 934 | R | NgoWPORF742P (100% identity) | Ngo13484ORF932P | |
| 935 | L-lactate dehydrogenase | |||
| 1027 | C32 tRNA thiolase | |||
| 1028 | R | NgoWPIIP (100% identity) | CCACC | Ngo13484IP |
| 1029 | M | M.Ngo9343ORF5525P (97% identity) | CCACC | M.Ngo13484I |
| 1030 | peptidyl-prolyl cis-trans isomerase A | |||