Lactobacillus rhamnosus NCTC13764 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Lactobacillus rhamnosus NCTC13764 RM systems
Ref:
REBASE ref # 22501
Complete sequence: 2,988,387 bp
GenBank #: LR134331
REBASE acronym: Lrh13764
Org_num: 32388
All begin NCTC13764_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 828 | Uncharacterised protein | |||
| 829 | S | S.LrhY39I (100% identity) | ACANNNNNNNTCC | S.Lrh13764I |
| 830 | Uncharacterised protein | |||
| 2069 | Uncharacterised protein | |||
| 2070 | S | S2.LrhVSI43ORF9640P (96% identity) | S2.Lrh13764IIP | |
| 2071 | Type I restriction modification DNA specificity | |||
| 2072 | S | S2.LrhCASLORFCP (100% identity) | GGHANNNNNNNGTC | S1.Lrh13764II |
| 2073 | M | M.LrhsA5ORFBP (100% identity) | GGHANNNNNNNGTC | M.Lrh13764II |
| 2074 | R | LrhsA5ORFBP (100% identity) | GGHANNNNNNNGTC | Lrh13764IIP |
| 2075 | transcriptional regulator, AbrB family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1252 | amino acid permease family protein | |||
| 1253 | M | M.LrhsA5ORFDP (100% identity) | M.Lrh13764ORF1253P | |
| 1254 | Domain of uncharacterised function (DUF1998) | |||
| 1948 | DNA helicase, restriction/modification system | |||
| 1949 | RM | LrhsA5ORFCP (100% identity) | CAGRAG | Lrh13764III |
| 1950 | GMP synthase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1928 | helix-turn-helix family protein | |||
| 1929 | R | LrhsA5MrrP (100% identity) | Lrh13764MrrP | |
| 1930 | Plasmid pRiA4b ORF-3-like protein | |||