Shewanella putrefaciens NCTC10737 |
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Putative Shewanella putrefaciens NCTC10737 RM systems
Ref:
REBASE ref # 22501
Complete sequence: 4,999,751 bp
GenBank #: LR134321
REBASE acronym: Spu10737
Org_num: 32385
All begin NCTC10737_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1144 | Uncharacterised protein | |||
| 1145 | R | SbaCW2ORF19660P (98% identity) | GAAYNNNNNNNRTTGY | Spu10737IIP |
| 1146 | M | M.Sba128ORFCP (99% identity) | GAAYNNNNNNNRTTGY | M.Spu10737II |
| 1147 | S | S.SspOM32ORF10985P (62% identity) | GAAYNNNNNNNRTTGY | S.Spu10737II |
| 1148 | Uncharacterized conserved protein | |||
| 1224 | Predicted HKD family nuclease | |||
| 1225 | R | SspANAORF2961P (98% identity) | CAAYNNNNNNRTTAC | Spu10737IVP |
| 1226 | Fic/DOC family | |||
| 1227 | M | M.Sal17378ORF3600P (87% identity) | CAAYNNNNNNRTTAC | M.Spu10737IV |
| 1228 | S | S.SspLC6ORF320P (57% identity) | CAAYNNNNNNRTTAC | S.Spu10737IV |
| 1229 | cytochrome c biogenesis protein CcmA | |||
| 2233 | Uncharacterised protein | |||
| 2234 | M | M.Ssp305ORF12835P (100% identity) | GTAANNNNNNNTAGC | M.Spu10737III |
| 2235 | S | S.Ssp305ORF12835P (100% identity) | GTAANNNNNNNTAGC | S.Spu10737III |
| 2236 | Uncharacterized conserved protein | |||
| 2237 | Uncharacterized conserved protein | |||
| 2238 | R | Ssp305ORF12835P (99% identity) | GTAANNNNNNNTAGC | Spu10737IIIP |
| 2239 | Protein of uncharacterised function DUF45 | |||
| 4347 | Predicted transcriptional regulator | |||
| 4348 | M | M1.Pru12026I (98% identity) | GCCNNNNNGTTT | M1.Spu10737I |
| 4349 | Uncharacterised protein | |||
| 4350 | Divergent AAA domain | |||
| 4351 | M | M2.PspS1ORF14175P (95% identity) | GCCNNNNNGTTT | M2.Spu10737I |
| 4352 | S | S.EcoS1C3ORF4992P (75% identity) | GCCNNNNNGTTT | S.Spu10737I |
| 4353 | R | Ssp305ORF2045P (98% identity) | GCCNNNNNGTTT | Spu10737IP |
| 4354 | Virulence protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2403 | RNA polymerase-associated protein rapA | |||
| 2404 | M | M.Ssp5B01ORF1355P (85% identity) | GCACAC | M.Spu10737VI |
| 2405 | Protein of uncharacterised function (DUF3780) | |||
| 4046 | Protein of uncharacterised function (DUF2970) | |||
| 4047 | M | M.Ssp305ORF570P (100% identity) | GATC | M.Spu10737V |
| 4048 | Uncharacterized protein conserved in bacteria | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 379 | mobile mystery protein B | |||
| 380 | R | Sba1039ORFFP (99% identity) | Spu10737ORF380P | |
| 381 | D-malate degradation protein R | |||