Salmonella enterica subsp. enterica NCTC129 |
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Putative Salmonella enterica subsp. enterica NCTC129 RM systems
Ref:
REBASE ref # 22501
Complete sequence: 4,839,172 bp
GenBank #: LR134140
REBASE acronym: Sen129
Org_num: 32435
All begin NCTC129_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2378 | membrane protein | |||
| 2379 | R | Spy5740IP (95% identity) | GACNNNNNNNRTCC | Sen129IIP |
| 2380 | M | M.SenS3ORF11567P (84% identity) | GACNNNNNNNRTCC | M.Sen129II |
| 2381 | S | S.SenS3ORF11567P (82% identity) | GACNNNNNNNRTCC | S.Sen129II |
| 2382 | Type-1 restriction enzyme EcoEI specificity | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3829 | DamX protein | |||
| 3830 | M | DNA adenine methylase | GATC | M.Sen129DamP |
| 3831 | ribulose-phosphate 3-epimerase | |||
| 3939 | protein yhdU | |||
| 3940 | M | methyltransferase | ATGCAT | M.Sen129ORF3940P |
| 3941 | Fis DNA-binding protein | |||
| 4774 | C4-type zinc finger protein, DksA/TraR family | |||
| ??? | M | M.SspA39ORFGP (99% identity) | M.Sen129ORF4775P | |
| 4777 | possible endonuclease | |||
| 5921 | metal-dependent phospho hydrolase | |||
| ??? | M | M.SenLiv11DcmP (99% identity) | M.Sen129ORF5922P | |
| ??? | V | V.SenS50DcmP (99% identity) | V.Sen129ORF5922P | |
| 5927 | inner membrane transporter yedA | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1764 | cytoplasmic protein | |||
| ??? | R | Ssp6947IIP (99% identity) | CAGAG | Sen129IP |
| ??? | M | M.SenZYXORFDP (100% identity) | CAGAG | M.Sen129I |
| 1769 | metabolite transport protein | |||