Pseudomonas aeruginosa B41226 |
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Putative Pseudomonas aeruginosa B41226 RM systems
Ref: Veeraraghavan,B. et al. unpublished
REBASE ref # 27887
Complete sequence: 6,814,295 bp
GenBank #: CP034368
REBASE acronym: Pae41226
Org_num: 32235
All begin EJA96_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 28455 | DUF91 domain-containing protein | |||
| 28460 | S | S.PaesAG1ORF6375P (100% identity) | CACNNNNNNNRTGT | S.Pae41226ORF28465P |
| 28465 | M | M.PaesAG1ORF6375P (100% identity) | CACNNNNNNNRTGT | M.Pae41226ORF28465P |
| ??? | R | PaePAL01ORF31785P (100% identity) | CACNNNNNNNRTGT | Pae41226ORF28465P |
| 28480 | peptidase M15 | |||
| 28720 | restriction endonuclease subunit S | |||
| 28725 | M | M.PmoB5ORF1050P (100% identity) | TCCANNNNNNCGT | M.Pae41226ORF28725P |
| 28730 | S | S.PmoB5ORF1050P (100% identity) | TCCANNNNNNCGT | S.Pae41226ORF28725P |
| 28735 | 410 aa hypothetical protein | |||
| 28740 | hydroxyacid dehydrogenase | |||
| 28745 | 364 aa hypothetical protein | |||
| 28750 | ATPase | |||
| 28755 | VWA domain-containing protein | |||
| 28760 | R | Ssp0042ORF670P (100% identity) | TCCANNNNNNCGT | Pae41226ORF28725P |
| 28765 | M48 family peptidase | |||
| 30095 | cell filamentation protein Fic | |||
| 30100 | R | SacT018ORFDP (99% identity) | CAGNNNNNNCTCG | Pae41226ORF30115P |
| 30105 | anticodon nuclease | |||
| 30110 | S | S.Pae501ORF12690P (100% identity) | CAGNNNNNNCTCG | S.Pae41226ORF30115P |
| 30115 | M | M.SacT018ORFDP (100% identity) | CAGNNNNNNCTCG | M.Pae41226ORF30115P |
| 30120 | MarR family transcriptional regulator | |||
| 30645 | site-specific integrase | |||
| 30650 | M | M.Paes32ORF100P (100% identity) | M.Pae41226ORF30650P | |
| 30655 | S | S.Paes32ORF100P (100% identity) | S.Pae41226ORF30650P | |
| 30660 | R | Paes32ORF100P (100% identity) | Pae41226ORF30650P | |
| 30665 | XRE family transcriptional regulator | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3390 | Arc family DNA-binding protein | |||
| 3395 | M | M.Paes32ORF1382P (100% identity) | M.Pae41226ORF3395P | |
| 3400 | nucleoid-associated protein YejK | |||
| 17020 | IS3 family transposase | |||
| 17025 | M | M.PspB111ORF7090P (36% identity) | M.Pae41226ORF17025P | |
| 17030 | 70 aa hypothetical protein | |||
| 30165 | DNA gyrase subunit B | |||
| 30170 | RM | Paes32ORF5P (100% identity) | GATCGAG | Pae41226ORF30170P |
| 30175 | 83 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 16610 | IS3 family transposase | |||
| 16615 | R | Paes32ORF4058P (100% identity) | Pae41226ORF16620P | |
| 16620 | M | M.Paes32ORF4058P (100% identity) | M.Pae41226ORF16620P | |
| 16625 | abortive phage resistance protein | |||